RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 NOTCH4Q99466 2003 aa15.87■□□□□ 0.13
ATG4D-211ENST00000589753 A0A0A6YYK5 440 aaPredicted RBP15.86■□□□□ 0.13
ATG4D-211ENST00000589753 A0A0U1RQJ8 604 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 SOBPA7XYQ1 873 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 BTNL10A8MVZ5 291 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 COCHO43405 550 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 PDGFRAP16234 1089 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 SDC4P31431 198 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 ATP5C1P36542 298 aaKnown RBP15.86■□□□□ 0.13
ATG4D-211ENST00000589753 SMAD4Q13485 552 aaKnown RBP15.86■□□□□ 0.13
ATG4D-211ENST00000589753 CBX2Q14781 532 aaPredicted RBP15.86■□□□□ 0.13
ATG4D-211ENST00000589753 HS1BP3Q53T59 392 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 STXBP5Q5T5C0 1151 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 TRNP1Q6NT89 227 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 MSANTD2Q6P1R3 559 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 KLHDC10Q6PID8 442 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 GET4Q7L5D6 327 aaPredicted RBP15.86■□□□□ 0.13
ATG4D-211ENST00000589753 ATRIPQ8WXE1 791 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 SUSD6Q92537 303 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 SLC46A2Q9BY10 475 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 TSGA10Q9BZW7 698 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 POMKQ9H5K3 350 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 SLITRK6Q9H5Y7 841 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 OSGEPQ9NPF4 335 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 RRN3Q9NYV6 651 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 ANAPC7Q9UJX3 599 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 PYCARDQ9ULZ3 195 aa15.86■□□□□ 0.13
ATG4D-211ENST00000589753 TRAV19A0A0A6YYK7 116 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 GRXCR2A6NFK2 248 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 DPYSL4O14531 572 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 ZSCAN12O43309 604 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 MBTPS2O43462 519 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 KRT86O43790 486 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 MTA2O94776 668 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 OLFM2O95897 454 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 TBX18O95935 607 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 DESP17661 470 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 HDCP19113 662 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 PTPN9P43378 593 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 NOP2P46087 812 aaKnown RBP15.85■□□□□ 0.13
ATG4D-211ENST00000589753 SULT1E1P49888 294 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 ZNF143P52747 638 aaPredicted RBP15.85■□□□□ 0.13
ATG4D-211ENST00000589753 EFEMP1Q12805 493 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 SLC25A52Q3SY17 297 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 LEXMQ3ZCV2 418 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 ARL14EPQ8N8R7 260 aaPredicted RBP15.85■□□□□ 0.13
ATG4D-211ENST00000589753 DQX1Q8TE96 717 aaKnown RBP15.85■□□□□ 0.13
ATG4D-211ENST00000589753 FNIP1Q8TF40 1166 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 FGF13Q92913 245 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 CFAP57Q96MR6 1250 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 SLC22A12Q96S37 553 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 CYP2S1Q96SQ9 504 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 NPY6RQ99463 290 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 TRIM7Q9C029 511 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 RNF38Q9H0F5 515 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 SMOC2Q9H3U7 446 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 MARCH2Q9P0N8 246 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 RASAL2Q9UJF2 1139 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 DNMT3LQ9UJW3 386 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 DUSP10Q9Y6W6 482 aa15.85■□□□□ 0.13
ATG4D-211ENST00000589753 DENND4CQ5VZ89 1909 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 ANAPC1Q9H1A4 1944 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 M0QYT0 321 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 MYO1FO00160 1098 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 MDM4O15151 490 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 TRUB2O95900 331 aaKnown RBP15.84■□□□□ 0.13
ATG4D-211ENST00000589753 CKMP06732 381 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 MBL2P11226 248 aaPredicted RBP15.84■□□□□ 0.13
ATG4D-211ENST00000589753 PSMA2P25787 234 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 GBP1P32455 592 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 AVPR1AP37288 418 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 NAP1L1P55209 391 aaKnown RBP15.84■□□□□ 0.13
ATG4D-211ENST00000589753 PITX1P78337 314 aaPredicted RBP15.84■□□□□ 0.13
ATG4D-211ENST00000589753 OGDHQ02218 1023 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 CCDC14Q49A88 953 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 ZNF662Q6ZS27 426 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 TAC4Q86UU9 113 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 MIB1Q86YT6 1006 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 NPAS3Q8IXF0 933 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 CMTM8Q8IZV2 173 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 NT5C3BQ969T7 300 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 BTBD6Q96KE9 485 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 SERPINB11Q96P15 392 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 TBCBQ99426 244 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 CNPY3Q9BT09 278 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 FAM204AQ9H8W3 233 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.84■□□□□ 0.13
ATG4D-211ENST00000589753 GDE1Q9NZC3 331 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 TRIM10Q9UDY6 481 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 IP6K2Q9UHH9 426 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 SFMBT1Q9UHJ3 866 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 LCMT1Q9UIC8 334 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 CDH7Q9ULB5 785 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 DOCK6Q96HP0 2047 aa15.84■□□□□ 0.13
ATG4D-211ENST00000589753 SZT2Q5T011 3432 aa15.83■□□□□ 0.13
ATG4D-211ENST00000589753 CCP110O43303 1012 aa15.83■□□□□ 0.12
ATG4D-211ENST00000589753 BUB1O43683 1085 aa15.83■□□□□ 0.12
ATG4D-211ENST00000589753 TFE3P19532 575 aaPredicted RBP15.83■□□□□ 0.12
ATG4D-211ENST00000589753 ARHGAP25P42331 645 aa15.83■□□□□ 0.12
ATG4D-211ENST00000589753 HADHBP55084 474 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms