RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 ERBB2P04626 1255 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 CD19P15391 556 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 COMTP21964 271 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 ATXN1P54253 815 aaKnown RBP6.13□□□□□ -1.43
TUBD1-208ENST00000588009 PRKG2Q13237 762 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 NFIXQ14938 502 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 TBRG1Q3YBR2 411 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 NRN1LQ496H8 165 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 SLC45A4Q5BKX6 768 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 ZNF484Q5JVG2 852 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 WDR45BQ5MNZ6 344 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 NEK10Q6ZWH5 1172 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 DTX2Q86UW9 622 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 CIR1Q86X95 450 aaPredicted RBP6.13□□□□□ -1.43
TUBD1-208ENST00000588009 OR4N4Q8N0Y3 316 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 KTI12Q96EK9 354 aaPredicted RBP6.13□□□□□ -1.43
TUBD1-208ENST00000588009 RNF31Q96EP0 1072 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 C7orf26Q96N11 449 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 BARD1Q99728 777 aaKnown RBP6.13□□□□□ -1.43
TUBD1-208ENST00000588009 CHCHD6Q9BRQ6 235 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 ACTRT3Q9BYD9 372 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 TPSD1Q9BZJ3 242 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 GALNT9Q9HCQ5 603 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 TRIM36Q9NQ86 728 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 TMEM74BQ9NUR3 256 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 TMLHEQ9NVH6 421 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 INTS13Q9NVM9 706 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 CLIC5Q9NZA1 410 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 NKX1-2Q9UD57 310 aaPredicted RBP6.13□□□□□ -1.43
TUBD1-208ENST00000588009 MAP3K2Q9Y2U5 619 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 NOX1Q9Y5S8 564 aa6.13□□□□□ -1.43
TUBD1-208ENST00000588009 A0A1W2PPH5 198 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 K7ENM7 598 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 KLK10O43240 276 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 RTN3O95197 1032 aaPredicted RBP6.12□□□□□ -1.43
TUBD1-208ENST00000588009 PLATP00750 562 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 TMEM225BP0DP42 221 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 CPA1P15085 419 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 DRD1P21728 446 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 HIBADHP31937 336 aaKnown RBP6.12□□□□□ -1.43
TUBD1-208ENST00000588009 DCAF7P61962 342 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 SPDYE7PQ495Y7 208 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 SPATA1Q5VX52 437 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 FAM90A2PQ658T7 463 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 ITPRIPL1Q6GPH6 555 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 ANO7Q6IWH7 933 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 CCDC144NLQ6NUI1 221 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 C16orf54Q6UWD8 224 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 SUPT20HQ8NEM7 779 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 TDRD7Q8NHU6 1098 aaKnown RBP6.12□□□□□ -1.43
TUBD1-208ENST00000588009 OVCA2Q8WZ82 227 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 FAM89AQ96GI7 184 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 REXO5Q96IC2 774 aaKnown RBP6.12□□□□□ -1.43
TUBD1-208ENST00000588009 EIF3CQ99613 913 aaKnown RBP6.12□□□□□ -1.43
TUBD1-208ENST00000588009 ALOXE3Q9BYJ1 711 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 RMI1Q9H9A7 625 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 BAG5Q9UL15 447 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 CYP46A1Q9Y6A2 500 aa6.12□□□□□ -1.43
TUBD1-208ENST00000588009 ANKRD18BA2A2Z9 1011 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 M0QYT0 321 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 SEPT4O43236 478 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 GFPT2O94808 682 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 PDHA1P08559 390 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 ACO1P21399 889 aaKnown RBP6.11□□□□□ -1.43
TUBD1-208ENST00000588009 HNRNPMP52272 730 aaKnown RBP eCLIP6.11□□□□□ -1.43
TUBD1-208ENST00000588009 VAV2P52735 878 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 EIF4A1P60842 406 aaKnown RBP6.11□□□□□ -1.43
TUBD1-208ENST00000588009 SEMA3BQ13214 749 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 DCTN1Q14203 1278 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 KCNJ12Q14500 433 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 KRT32Q14532 448 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 BAK1Q16611 211 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 AASDHQ4L235 1098 aaPredicted RBP6.11□□□□□ -1.43
TUBD1-208ENST00000588009 KRT27Q7Z3Y8 459 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 LIMS2Q7Z4I7 341 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.11□□□□□ -1.43
TUBD1-208ENST00000588009 FAM71DQ8N9W8 422 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 ANKRD52Q8NB46 1076 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 SNRNP27Q8WVK2 155 aaKnown RBP6.11□□□□□ -1.43
TUBD1-208ENST00000588009 STAMQ92783 540 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 GLG1Q92896 1179 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 RNF125Q96EQ8 232 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 ACAD9Q9H845 621 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 PLEKHA2Q9HB19 425 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 GLOD4Q9HC38 313 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 RXFP3Q9NSD7 469 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 FBXO28Q9NVF7 368 aa6.11□□□□□ -1.43
TUBD1-208ENST00000588009 TRGV11A0A075B6L2 103 aa6.1□□□□□ -1.43
TUBD1-208ENST00000588009 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
TUBD1-208ENST00000588009 GAGE12BA1L429 117 aa6.1□□□□□ -1.43
TUBD1-208ENST00000588009 A1L4Q6 167 aa6.1□□□□□ -1.43
TUBD1-208ENST00000588009 GAGE12HA6NDE8 117 aa6.1□□□□□ -1.43
TUBD1-208ENST00000588009 PGPEP1LA6NFU8 196 aa6.1□□□□□ -1.43
TUBD1-208ENST00000588009 MARCH11A6NNE9 402 aa6.1□□□□□ -1.43
TUBD1-208ENST00000588009 PATE3B3GLJ2 98 aa6.1□□□□□ -1.43
TUBD1-208ENST00000588009 M0QZQ0 153 aa6.1□□□□□ -1.43
TUBD1-208ENST00000588009 RNASET2O00584 256 aaKnown RBP6.1□□□□□ -1.43
TUBD1-208ENST00000588009 KIAA0355O15063 1070 aa6.1□□□□□ -1.43
TUBD1-208ENST00000588009 FIBPO43427 364 aa6.1□□□□□ -1.43
TUBD1-208ENST00000588009 USO1O60763 962 aaKnown RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms