RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 NLRP1Q9C000 1473 aa3.53□□□□□ -1.84
VAPA-208ENST00000584796 NALCNQ8IZF0 1738 aa3.53□□□□□ -1.85
VAPA-208ENST00000584796 CD8B2A6NJW9 211 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 H3BML4 177 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 BTN3A1O00481 513 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 OFD1O75665 1012 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 PF4V1P10720 104 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 ATF7P17544 494 aaPredicted RBP3.52□□□□□ -1.85
VAPA-208ENST00000584796 DIO1P49895 249 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 NEK2P51955 445 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 COPB1P53618 953 aaKnown RBP3.52□□□□□ -1.85
VAPA-208ENST00000584796 NANOS2P60321 138 aaKnown RBP3.52□□□□□ -1.85
VAPA-208ENST00000584796 ZNF91Q05481 1191 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 TMTC4Q5T4D3 741 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 DENND1CQ8IV53 801 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 OR6B3Q8NGW1 331 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 IGFBPL1Q8WX77 278 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 TRIM5Q9C035 493 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 SMURF2Q9HAU4 748 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 XPNPEP3Q9NQH7 507 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.52□□□□□ -1.85
VAPA-208ENST00000584796 GABBR1Q9UBS5 961 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 LPAR3Q9UBY5 353 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 PRDM15P57071 1507 aaPredicted RBP3.52□□□□□ -1.85
VAPA-208ENST00000584796 CDK12Q9NYV4 1490 aaPredicted RBP3.52□□□□□ -1.85
VAPA-208ENST00000584796 CEP350Q5VT06 3117 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 CLIP1P30622 1438 aa3.52□□□□□ -1.85
VAPA-208ENST00000584796 JCADQ9P266 1359 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 UTRNP46939 3433 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 PRR23D1E9PI22 279 aaPredicted RBP3.51□□□□□ -1.85
VAPA-208ENST00000584796 SPRY2O43597 315 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 ALPLP05186 524 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 PRR23D2P0DMB1 279 aaPredicted RBP3.51□□□□□ -1.85
VAPA-208ENST00000584796 NCLP19338 710 aaKnown RBP3.51□□□□□ -1.85
VAPA-208ENST00000584796 HTR1BP28222 390 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 TIAL1Q01085 375 aaKnown RBP eCLIP3.51□□□□□ -1.85
VAPA-208ENST00000584796 ID2Q02363 134 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 SLC13A2Q13183 592 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 IFIT1BQ5T764 474 aaKnown RBP3.51□□□□□ -1.85
VAPA-208ENST00000584796 DENND2CQ68D51 928 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 ANO7Q6IWH7 933 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 KIAA1161Q6NSJ0 714 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 TMEM65Q6PI78 240 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 DCDC5Q6ZRR9 648 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 SPARTQ8N0X7 666 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 MAFAQ8NHW3 353 aaPredicted RBP3.51□□□□□ -1.85
VAPA-208ENST00000584796 DNAJB14Q8TBM8 379 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 RAPGEF4Q8WZA2 1011 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 WDYHV1Q96HA8 205 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 LYZL4Q96KX0 146 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 NT5C1BQ96P26 610 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 VN1R3Q9BXE9 311 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 ZMAT3Q9HA38 289 aaKnown RBP3.51□□□□□ -1.85
VAPA-208ENST00000584796 TRIM36Q9NQ86 728 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 SNX15Q9NRS6 342 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 TMEM184CQ9NVA4 438 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 ZSCAN32Q9NX65 697 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 DNMT3BQ9UBC3 853 aaKnown RBP3.51□□□□□ -1.85
VAPA-208ENST00000584796 HEY2Q9UBP5 337 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 IP6K2Q9UHH9 426 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 CDY1Q9Y6F8 540 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 CAMSAP2Q08AD1 1489 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 EIF2AK4Q9P2K8 1649 aaKnown RBP3.51□□□□□ -1.85
VAPA-208ENST00000584796 GLI3P10071 1580 aa3.51□□□□□ -1.85
VAPA-208ENST00000584796 TNS1Q9HBL0 1735 aaKnown RBP3.5□□□□□ -1.85
VAPA-208ENST00000584796 AFF2P51816 1311 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 CROCC2H7BZ55 1655 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 LRRC9Q6ZRR7 1453 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 BCL9LQ86UU0 1499 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 TTC3P53804 2025 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 A0A1W2PPL8 197 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 FAM90A8PA6NJQ4 464 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 TMEM233B4DJY2 109 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 KIF3BO15066 747 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 AP1G1O43747 822 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 TMPRSS11DO60235 418 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 UBXN7O94888 489 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 FAM90A13PP0C7W8 464 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 FAM90A24PP0C7X0 464 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 CTSAP10619 480 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 PSG1P11464 419 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 CYP19A1P11511 503 aaPredicted RBP3.5□□□□□ -1.85
VAPA-208ENST00000584796 EN2P19622 333 aaPredicted RBP3.5□□□□□ -1.85
VAPA-208ENST00000584796 EPHA3P29320 983 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 PRKAR1BP31321 381 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 UQCRC1P31930 480 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 HTR6P50406 440 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 TIRAPP58753 221 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 RPS13P62277 151 aaKnown RBP3.5□□□□□ -1.85
VAPA-208ENST00000584796 RAB32Q13637 225 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 DCAF12L1Q5VU92 463 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 B3GNT9Q6UX72 402 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 RANBP10Q6VN20 620 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 UBE2Q1Q7Z7E8 422 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 DAAM2Q86T65 1068 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 ARFGAP1Q8N6T3 406 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 MAML1Q92585 1016 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 HOOK2Q96ED9 719 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 ZFYVE19Q96K21 471 aa3.5□□□□□ -1.85
VAPA-208ENST00000584796 POT1Q9NUX5 634 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms