RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 MYO10Q9HD67 2058 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 RCCD1A6NED2 376 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 C2CD4BA6NLJ0 364 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 DPYSL4O14531 572 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 MOSPD3O75425 235 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 GRAP2O75791 330 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 PDGFRAP16234 1089 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 GPD1P21695 349 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 SDC4P31431 198 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 RFC1P35251 1148 aaPredicted RBP12.18□□□□□ -0.46
CDRT1-207ENST00000583965 ATP5C1P36542 298 aaKnown RBP12.18□□□□□ -0.46
CDRT1-207ENST00000583965 FLT3P36888 993 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 ARHGAP25P42331 645 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 PTPN9P43378 593 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 PGFP49763 221 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 ZNF143P52747 638 aaPredicted RBP12.18□□□□□ -0.46
CDRT1-207ENST00000583965 RPL7AP62424 266 aaKnown RBP12.18□□□□□ -0.46
CDRT1-207ENST00000583965 SMAD4Q13485 552 aaKnown RBP12.18□□□□□ -0.46
CDRT1-207ENST00000583965 ACAP1Q15027 740 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 IFI16Q16666 785 aaKnown RBP12.18□□□□□ -0.46
CDRT1-207ENST00000583965 SLC5A9Q2M3M2 681 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 SLC25A52Q3SY17 297 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 DCAF6Q58WW2 860 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 RSRC2Q7L4I2 434 aaKnown RBP12.18□□□□□ -0.46
CDRT1-207ENST00000583965 DEFB106AQ8N104 65 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 JOSD2Q8TAC2 188 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 RXFP2Q8WXD0 754 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 SUSD6Q92537 303 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 EDEM1Q92611 657 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 NT5C3BQ969T7 300 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 TCEAL4Q96EI5 215 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 NCAPGQ9BPX3 1015 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 LACRTQ9GZZ8 138 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 SMOC2Q9H3U7 446 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 TASP1Q9H6P5 420 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 DNMT3LQ9UJW3 386 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 ANAPC7Q9UJX3 599 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 COL6A3P12111 3177 aa12.18□□□□□ -0.46
CDRT1-207ENST00000583965 TRAV19A0A0A6YYK7 116 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 GOLGA6L9A6NEM1 432 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 MYO1FO00160 1098 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 GJB6O95452 261 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 OLFM2O95897 454 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 F9P00740 461 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 KCNA5P22460 613 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 WEE1P30291 646 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 GBP1P32455 592 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 NOP2P46087 812 aaKnown RBP12.17□□□□□ -0.46
CDRT1-207ENST00000583965 KPNA1P52294 538 aaPredicted RBP12.17□□□□□ -0.46
CDRT1-207ENST00000583965 CYP4F8P98187 520 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 NNTQ13423 1086 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 PIGHQ14442 188 aaPredicted RBP12.17□□□□□ -0.46
CDRT1-207ENST00000583965 CBX2Q14781 532 aaPredicted RBP12.17□□□□□ -0.46
CDRT1-207ENST00000583965 TEAD2Q15562 447 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 ARHGAP29Q52LW3 1261 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 C10orf120Q5SQS8 335 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 GPR158Q5T848 1215 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 SYPL2Q5VXT5 272 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 TXNDC8Q6A555 127 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 RNF10Q8N5U6 811 aaKnown RBP12.17□□□□□ -0.46
CDRT1-207ENST00000583965 EMC1Q8N766 993 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 NIPA2Q8N8Q9 360 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 MAB21L3Q8N8X9 362 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 MAFAQ8NHW3 353 aaPredicted RBP12.17□□□□□ -0.46
CDRT1-207ENST00000583965 DQX1Q8TE96 717 aaKnown RBP12.17□□□□□ -0.46
CDRT1-207ENST00000583965 PPM1EQ8WY54 764 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 PGAP3Q96FM1 320 aaPredicted RBP12.17□□□□□ -0.46
CDRT1-207ENST00000583965 SERPINB11Q96P15 392 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 NPY6RQ99463 290 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 CNPY3Q9BT09 278 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 NACA2Q9H009 215 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 CCSER2Q9H7U1 834 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 TRPC7Q9HCX4 862 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.17□□□□□ -0.46
CDRT1-207ENST00000583965 GDE1Q9NZC3 331 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 IP6K2Q9UHH9 426 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 NAALADL1Q9UQQ1 740 aa12.17□□□□□ -0.46
CDRT1-207ENST00000583965 USP15Q9Y4E8 981 aaPredicted RBP12.17□□□□□ -0.46
CDRT1-207ENST00000583965 ZFP37Q9Y6Q3 630 aaPredicted RBP12.17□□□□□ -0.46
CDRT1-207ENST00000583965 MYOFQ9NZM1 2061 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 C2orf78A6NCI8 922 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 H3BQ06 376 aaPredicted RBP12.16□□□□□ -0.46
CDRT1-207ENST00000583965 COCHO43405 550 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 MBTPS2O43462 519 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 ENDOD1O94919 500 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 IGLV3-25P01717 112 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 TUBB4AP04350 444 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 GJA1P17302 382 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 CEBPBP17676 345 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 HDCP19113 662 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 PSMA2P25787 234 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 MAN1A1P33908 653 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 SLC7A9P82251 487 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 COG7P83436 770 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 CLUL1Q15846 466 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 PUS10Q3MIT2 529 aaKnown RBP12.16□□□□□ -0.46
CDRT1-207ENST00000583965 LEXMQ3ZCV2 418 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 CCDC14Q49A88 953 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 TRNP1Q6NT89 227 aa12.16□□□□□ -0.46
CDRT1-207ENST00000583965 STRADAQ7RTN6 431 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms