RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	PNPLA2	Q96AD5	504 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	SNRNP40	Q96DI7	357 aa	Known RBP	5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	SUSD3	Q96L08	255 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	PPP1R10	Q96QC0	940 aa	Known RBP	5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	SLC22A12	Q96S37	553 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	MENT	Q9BUN1	341 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	DUSP23	Q9BVJ7	150 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	INTS2	Q9H0H0	1204 aa	Known RBP	5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	RIOX1	Q9H6W3	641 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	CYLD	Q9NQC7	956 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	CCM2L	Q9NUG4	571 aa	Predicted RBP	5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	TMLHE	Q9NVH6	421 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	PPP4R2	Q9NY27	417 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	GCNT4	Q9P109	453 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	DEC1	Q9P2X7	70 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	PISD	Q9UG56	409 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	TLK1	Q9UKI8	766 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	PCDHGA9	Q9Y5G4	932 aa	Known RBP	5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	PCDHA10	Q9Y5I2	948 aa		5.37	□□□□□ -1.55
MSI2-216	ENST00000582772	DYSF	O75923	2080 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	TRAV19	A0A0A6YYK7	116 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	PNMA6F	A0A0J9YX94	578 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	SCAMP1	O15126	338 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	SDC3	O75056	442 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	LRCH4	O75427	683 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	FSBP	O95073	299 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	ALX3	O95076	343 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	IFNA2	P01563	188 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	CKM	P06732	381 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	PSAP	P07602	524 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	KRT19	P08727	400 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	HGF	P14210	728 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	PFKL	P17858	780 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	ATP5J	P18859	108 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	PDC	P20941	246 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	IL4R	P24394	825 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	TUFM	P49411	452 aa	Known RBP	5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	NT5C2	P49902	561 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	ZXDB	P98169	803 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	SPIDR	Q14159	915 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	PDCD2	Q16342	344 aa	Predicted RBP	5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	MTERF2	Q49AM1	385 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	CEP55	Q53EZ4	464 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	SLC45A4	Q5BKX6	768 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	HMBOX1	Q6NT76	420 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	DHX32	Q7L7V1	743 aa	Known RBP	5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	NIPA1	Q7RTP0	329 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	FILIP1	Q7Z7B0	1213 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	B3GNT8	Q7Z7M8	397 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	ULK2	Q8IYT8	1036 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	TTC9B	Q8N6N2	239 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	IL22RA1	Q8N6P7	574 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	SIMC1	Q8NDZ2	872 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	APPL2	Q8NEU8	664 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	SSH1	Q8WYL5	1049 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	USP7	Q93009	1102 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	RELT	Q969Z4	430 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	C19orf60	Q96EN9	201 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	COX4I2	Q96KJ9	171 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	PGLYRP2	Q96PD5	576 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	HAPLN3	Q96S86	360 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	DUSP9	Q99956	384 aa	Known RBP	5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	EFHD1	Q9BUP0	239 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	ENKD1	Q9H0I2	346 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	EBF2	Q9HAK2	575 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	SGK2	Q9HBY8	427 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	SLAMF7	Q9NQ25	335 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	ASF1B	Q9NVP2	202 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	GABBR1	Q9UBS5	961 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	DAXX	Q9UER7	740 aa	Predicted RBP	5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	TPX2	Q9ULW0	747 aa	Known RBP	5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	DAAM1	Q9Y4D1	1078 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	PCDHGB7	Q9Y5F8	929 aa		5.36	□□□□□ -1.55
MSI2-216	ENST00000582772	CNTRL	Q7Z7A1	2325 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772		A0A1B0GUA9	196 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	OR6C75	A6NL08	312 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	C3orf80	F5H4A9	247 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	DDX39A	O00148	427 aa	Known RBP	5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	TBX3	O15119	743 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	FOXP2	O15409	715 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	PHF1	O43189	567 aa	Predicted RBP	5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	MAGEC1	O60732	1142 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	SOAT2	O75908	522 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	LARGE1	O95461	756 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	PRKAR1A	P10644	381 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	PC	P11498	1178 aa	Known RBP	5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	ARF4	P18085	180 aa	Predicted RBP	5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	ITIH1	P19827	911 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	RABIF	P47224	123 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	ARSD	P51689	593 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	GAD2	Q05329	585 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	PDE4C	Q08493	712 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	NCBP1	Q09161	790 aa	Known RBP	5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	MYBPC2	Q14324	1141 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	SLC35G1	Q2M3R5	365 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	CRB2	Q5IJ48	1285 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	B4GALNT3	Q6L9W6	998 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	ZCCHC8	Q6NZY4	707 aa	Known RBP	5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	GUSBP11	Q6P575	273 aa		5.35	□□□□□ -1.55
MSI2-216	ENST00000582772	EFL1	Q7Z2Z2	1120 aa	Known RBP	5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms