RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 MTMR4Q9NYA4 1195 aa5.74□□□□□ -1.49
CAPN3-217ENST00000567817 TAB2Q9NYJ8 693 aa5.74□□□□□ -1.49
CAPN3-217ENST00000567817 USP36Q9P275 1121 aaKnown RBP5.74□□□□□ -1.49
CAPN3-217ENST00000567817 SERPINB13Q9UIV8 391 aa5.74□□□□□ -1.49
CAPN3-217ENST00000567817 MAPRE3Q9UPY8 281 aa5.74□□□□□ -1.49
CAPN3-217ENST00000567817 MYRFQ9Y2G1 1151 aa5.74□□□□□ -1.49
CAPN3-217ENST00000567817 CTDP1Q9Y5B0 961 aaPredicted RBP5.74□□□□□ -1.49
CAPN3-217ENST00000567817 SLC30A1Q9Y6M5 507 aa5.74□□□□□ -1.49
CAPN3-217ENST00000567817 IGKV6D-41A0A0C4DH26 115 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 A0A0U1RQG5 324 aaPredicted RBP5.73□□□□□ -1.49
CAPN3-217ENST00000567817 TBX3O15119 743 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 KLRC4O43908 158 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 H2AFYO75367 372 aaKnown RBP5.73□□□□□ -1.49
CAPN3-217ENST00000567817 CLSTN1O94985 981 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 PRLRP16471 622 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 ANXA13P27216 316 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 RPS19P39019 145 aaKnown RBP5.73□□□□□ -1.49
CAPN3-217ENST00000567817 CCT6AP40227 531 aaKnown RBP5.73□□□□□ -1.49
CAPN3-217ENST00000567817 LSSP48449 732 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 ASIC1P78348 528 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 GABPAQ06546 454 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 ADCY2Q08462 1091 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 KIF5AQ12840 1032 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 MAN2A1Q16706 1144 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 HSP90AA4PQ58FG1 418 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 TMEM31Q5JXX7 168 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 MAP3K21Q5TCX8 1036 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 HAUS3Q68CZ6 603 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 CENPPQ6IPU0 288 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 KIAA1841Q6NSI8 718 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 WDR93Q6P2C0 686 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 ZNF771Q7L3S4 317 aaPredicted RBP5.73□□□□□ -1.49
CAPN3-217ENST00000567817 KANSL1Q7Z3B3 1105 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 KIAA1328Q86T90 577 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 FMNL3Q8IVF7 1028 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 TRIM58Q8NG06 486 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 TBCKQ8TEA7 893 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 LARP4BQ92615 738 aaKnown RBP5.73□□□□□ -1.49
CAPN3-217ENST00000567817 SYN2Q92777 582 aaPredicted RBP5.73□□□□□ -1.49
CAPN3-217ENST00000567817 ZKSCAN4Q969J2 545 aaPredicted RBP5.73□□□□□ -1.49
CAPN3-217ENST00000567817 DYNLL2Q96FJ2 89 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 CEP95Q96GE4 821 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 WWC2-AS2Q96NR7 200 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 ALS2CR12Q96Q35 445 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 TUBGCP2Q9BSJ2 902 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 DESI2Q9BSY9 194 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 TTYH3Q9C0H2 523 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 PITHD1Q9GZP4 211 aaPredicted RBP5.73□□□□□ -1.49
CAPN3-217ENST00000567817 VPS16Q9H269 839 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 C12orf65Q9H3J6 166 aaKnown RBP5.73□□□□□ -1.49
CAPN3-217ENST00000567817 DEF6Q9H4E7 631 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 TDRD3Q9H7E2 651 aaKnown RBP5.73□□□□□ -1.49
CAPN3-217ENST00000567817 VIPAS39Q9H9C1 493 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 MRPL44Q9H9J2 332 aaKnown RBP5.73□□□□□ -1.49
CAPN3-217ENST00000567817 MED4Q9NPJ6 270 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 LZTFL1Q9NQ48 299 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 PSD3Q9NYI0 1048 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 RNF14Q9UBS8 474 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 LRWD1Q9UFC0 647 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.73□□□□□ -1.49
CAPN3-217ENST00000567817 ZNF112Q9UJU3 913 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 JAG2Q9Y219 1238 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 GDAQ9Y2T3 454 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 TSC22D4Q9Y3Q8 395 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 SAR1BQ9Y6B6 198 aa5.73□□□□□ -1.49
CAPN3-217ENST00000567817 TTC26A0AVF1 554 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 TCP10L2B9ZVM9 353 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 SMIM22K7EJ46 135 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 ZBTB5O15062 677 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 TGM5O43548 720 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 MARCH6O60337 910 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 PRPF6O94906 941 aaKnown RBP5.72□□□□□ -1.49
CAPN3-217ENST00000567817 FOSP01100 380 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-217ENST00000567817 HSD3B2P26439 372 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 ARHGAP25P42331 645 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 MTIF2P46199 727 aaKnown RBP5.72□□□□□ -1.49
CAPN3-217ENST00000567817 VAV2P52735 878 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 PHC1P78364 1004 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 FKBP3Q00688 224 aaKnown RBP5.72□□□□□ -1.49
CAPN3-217ENST00000567817 ZNF543Q08ER8 600 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 ADAM15Q13444 863 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 LRRC26Q2I0M4 334 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 ZXDCQ2QGD7 858 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-217ENST00000567817 TMEM119Q4V9L6 283 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 HSP90B2PQ58FF3 399 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 HYIQ5T013 277 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 PAPD7Q5XG87 772 aaKnown RBP5.72□□□□□ -1.49
CAPN3-217ENST00000567817 ZNF585AQ6P3V2 769 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 POLNQ7Z5Q5 900 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 FUKQ8N0W3 1084 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 RNF10Q8N5U6 811 aaKnown RBP5.72□□□□□ -1.49
CAPN3-217ENST00000567817 OR14K1Q8NGZ2 314 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 ERMNQ8TAM6 284 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 RAD54LQ92698 747 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 NKD2Q969F2 451 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-217ENST00000567817 TEKT1Q969V4 418 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 EXOC4Q96A65 974 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 SLC7A6OSQ96CW6 309 aaPredicted RBP5.72□□□□□ -1.49
CAPN3-217ENST00000567817 MTMR8Q96EF0 704 aa5.72□□□□□ -1.49
CAPN3-217ENST00000567817 CNOT6LQ96LI5 555 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms