RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 PHACTR1Q9C0D0 580 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 ETNK1Q9HBU6 452 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 MTMR10Q9NXD2 777 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 GDAP2Q9NXN4 497 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 ARL2BPQ9Y2Y0 163 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 TEX264Q9Y6I9 313 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 DOCK3Q8IZD9 2030 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 CHADO15335 359 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 RARBP10826 455 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 GOT1P17174 413 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 YWHAZP63104 245 aaKnown RBP19.43■□□□□ 0.7
MSLN-207ENST00000566549 MGAT5Q09328 741 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 CST9Q5W186 159 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 CYTH2Q99418 400 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 C11orf84Q9BUA3 381 aaPredicted RBP19.43■□□□□ 0.7
MSLN-207ENST00000566549 PHTF1Q9UMS5 762 aa19.43■□□□□ 0.7
MSLN-207ENST00000566549 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.42■□□□□ 0.7
MSLN-207ENST00000566549 MYADML2A6NDP7 307 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 SMAPO00193 183 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 XPOTO43592 962 aaKnown RBP19.42■□□□□ 0.7
MSLN-207ENST00000566549 RASSF9O75901 435 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 KCNE1P15382 129 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 ADRA1DP25100 572 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 CRYBB1P53674 252 aaPredicted RBP19.42■□□□□ 0.7
MSLN-207ENST00000566549 DPYSL2Q16555 572 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 PRPF39Q86UA1 669 aaKnown RBP19.42■□□□□ 0.7
MSLN-207ENST00000566549 DEFB106AQ8N104 65 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 CSPG4P5Q96PW8 444 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 DHRS4Q9BTZ2 278 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 KLC2Q9H0B6 622 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 PPCSQ9HAB8 311 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 ALG13Q9NP73 1137 aaKnown RBP19.42■□□□□ 0.7
MSLN-207ENST00000566549 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.42■□□□□ 0.7
MSLN-207ENST00000566549 BCLAF3A2AJT9 711 aaKnown RBP19.42■□□□□ 0.7
MSLN-207ENST00000566549 PTGESO14684 152 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 FAM155BO75949 473 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 METTL18O95568 372 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 CTSHP09668 335 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 AMPD1P23109 780 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 PNPLA4P41247 253 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 NDUFV1P49821 464 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 SULT1E1P49888 294 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 AFF1P51825 1210 aaKnown RBP19.42■□□□□ 0.7
MSLN-207ENST00000566549 PTK7Q13308 1070 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 DCAF6Q58WW2 860 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 WSCD1Q658N2 575 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 FAM228AQ86W67 206 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 FUKQ8N0W3 1084 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 FITM2Q8N6M3 262 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 LRRC8CQ8TDW0 803 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 MZB1Q8WU39 189 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 CENPIQ92674 756 aaPredicted RBP19.42■□□□□ 0.7
MSLN-207ENST00000566549 KLC4Q9NSK0 619 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 IKBKGQ9Y6K9 419 aa19.42■□□□□ 0.7
MSLN-207ENST00000566549 CYB561D2O14569 222 aa19.41■□□□□ 0.7
MSLN-207ENST00000566549 SEPT7Q16181 437 aaKnown RBP19.41■□□□□ 0.7
MSLN-207ENST00000566549 FSCN1Q16658 493 aaKnown RBP19.41■□□□□ 0.7
MSLN-207ENST00000566549 KCNT2Q6UVM3 1135 aa19.41■□□□□ 0.7
MSLN-207ENST00000566549 CAND1Q86VP6 1230 aaKnown RBP19.41■□□□□ 0.7
MSLN-207ENST00000566549 CTAGE3PQ8IX95 158 aa19.41■□□□□ 0.7
MSLN-207ENST00000566549 TCP10LQ8TDR4 215 aa19.41■□□□□ 0.7
MSLN-207ENST00000566549 USP6NLQ92738 828 aa19.41■□□□□ 0.7
MSLN-207ENST00000566549 TNIP3Q96KP6 325 aa19.41■□□□□ 0.7
MSLN-207ENST00000566549 KLHL14Q9P2G3 628 aa19.41■□□□□ 0.7
MSLN-207ENST00000566549 SLC17A7Q9P2U7 560 aa19.41■□□□□ 0.7
MSLN-207ENST00000566549 PRKAG3Q9UGI9 489 aa19.41■□□□□ 0.7
MSLN-207ENST00000566549 TIMM13Q9Y5L4 95 aaPredicted RBP19.41■□□□□ 0.7
MSLN-207ENST00000566549 C6orf222P0C671 652 aaPredicted RBP19.41■□□□□ 0.7
MSLN-207ENST00000566549 FAAP100Q0VG06 881 aa19.41■□□□□ 0.7
MSLN-207ENST00000566549 PDK4Q16654 411 aa19.41■□□□□ 0.7
MSLN-207ENST00000566549 RTP4Q96DX8 246 aa19.41■□□□□ 0.7
MSLN-207ENST00000566549 MED10Q9BTT4 135 aa19.41■□□□□ 0.7
MSLN-207ENST00000566549 CFAP69A5D8W1 941 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 DNAJC8O75937 253 aaPredicted RBP19.4■□□□□ 0.7
MSLN-207ENST00000566549 INHBAP08476 426 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 ZNF157P51786 506 aaPredicted RBP19.4■□□□□ 0.7
MSLN-207ENST00000566549 RASA2Q15283 850 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 XKR4Q5GH76 650 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 MDH1BQ5I0G3 518 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 TBC1D1Q86TI0 1168 aaPredicted RBP19.4■□□□□ 0.7
MSLN-207ENST00000566549 ECHDC2Q86YB7 292 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 FETUBQ9UGM5 382 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 ZC3H7BQ9UGR2 993 aaKnown RBP19.4■□□□□ 0.7
MSLN-207ENST00000566549 MT-ND3P03897 115 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 MLH1P40692 756 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 ACADSBP45954 432 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 PURAQ00577 322 aaKnown RBP19.4■□□□□ 0.7
MSLN-207ENST00000566549 NME3Q13232 169 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 RALGAPA2Q2PPJ7 1873 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 SLC45A4Q5BKX6 768 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 CYB5D1Q6P9G0 228 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 CDKL3Q8IVW4 592 aaPredicted RBP19.4■□□□□ 0.7
MSLN-207ENST00000566549 PPM1NQ8N819 430 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 LPPQ93052 612 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 SERAC1Q96JX3 654 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 LGMNQ99538 433 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 CEP41Q9BYV8 373 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 DTLQ9NZJ0 730 aa19.4■□□□□ 0.7
MSLN-207ENST00000566549 TRIP12Q14669 1992 aaPredicted RBP19.39■□□□□ 0.69
MSLN-207ENST00000566549 XPO1O14980 1071 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms