RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 IFNAR2P48551 515 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 EFEMP1Q12805 493 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 RUNX3Q13761 415 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 ITPRIPL2Q3MIP1 535 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 OLFML1Q6UWY5 402 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 TOGARAM2Q6ZUX3 1019 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 HTR3DQ70Z44 454 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 MIB1Q86YT6 1006 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 SYN2Q92777 582 aaPredicted RBP22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 FAM149B1Q96BN6 582 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 SYT11Q9BT88 431 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 SYNCQ9H7C4 482 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 C8orf33Q9H7E9 229 aaPredicted RBP22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 POPDC2Q9HBU9 364 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 GTSE1Q9NYZ3 720 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 RASAL2Q9UJF2 1139 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 CAPN11Q9UMQ6 739 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 SH3BP1Q9Y3L3 701 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 WNT6Q9Y6F9 365 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 KMT2EQ8IZD2 1858 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 MDM4O15151 490 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 HSF2BPO75031 334 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 FYNP06241 537 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 YWHAZP63104 245 aaKnown RBP22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 ZBED6P86452 979 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 TNK2Q07912 1038 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 EFHC1Q5JVL4 640 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 IER5LQ5T953 404 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 SFMBT2Q5VUG0 894 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 NAA35Q5VZE5 725 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 SPECC1LQ69YQ0 1117 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 SLC26A9Q7LBE3 791 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 RALGPS2Q86X27 583 aaPredicted RBP22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 ZNF397Q8NF99 534 aaPredicted RBP22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 EDEM1Q92611 657 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 PBXIP1Q96AQ6 731 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 MFSD1Q9H3U5 465 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 EBF3Q9H4W6 596 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 LSM7Q9UK45 103 aaKnown RBP22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 HBS1LQ9Y450 684 aaKnown RBP22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 PIAS3Q9Y6X2 628 aa22.03■■□□□ 1.12
SHCBP1-205ENST00000566016 FAM86C2PA6NEL3 165 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 STC2O76061 302 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 NFATC1O95644 943 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 GYPCP04921 128 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 UNGP13051 313 aaPredicted RBP22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 MMP8P22894 467 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 KPNA1P52294 538 aaPredicted RBP22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 CENPCQ03188 943 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 NNTQ13423 1086 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 TRIM14Q14142 442 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 ASIC2Q16515 512 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 E4F1Q66K89 784 aaPredicted RBP22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 TRIM68Q6AZZ1 485 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 TPRG1Q6ZUI0 275 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 FAM183BPQ6ZVS7 135 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 ERICH1Q86X53 443 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 CPA6Q8N4T0 437 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 FBXL6Q8N531 539 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 TTC16Q8NEE8 873 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 PLD4Q96BZ4 506 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 C18orf8Q96DM3 657 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 PIWIL1Q96J94 861 aaKnown RBP22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 AGPAT1Q99943 283 aa22.02■■□□□ 1.12
SHCBP1-205ENST00000566016 MAN2B1O00754 1011 aa22.01■■□□□ 1.11
SHCBP1-205ENST00000566016 NCAM1P13591 858 aa22.01■■□□□ 1.11
SHCBP1-205ENST00000566016 ARSAP15289 507 aa22.01■■□□□ 1.11
SHCBP1-205ENST00000566016 Q6ZNB5 142 aa22.01■■□□□ 1.11
SHCBP1-205ENST00000566016 DCLK3Q9C098 648 aa22.01■■□□□ 1.11
SHCBP1-205ENST00000566016 RBSNQ9H1K0 784 aa22.01■■□□□ 1.11
SHCBP1-205ENST00000566016 ECT2Q9H8V3 914 aa22.01■■□□□ 1.11
SHCBP1-205ENST00000566016 TBC1D17Q9HA65 648 aa22.01■■□□□ 1.11
SHCBP1-205ENST00000566016 ZNF510Q9Y2H8 683 aa22.01■■□□□ 1.11
SHCBP1-205ENST00000566016 KIAA1549LQ6ZVL6 1849 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 KANSL1LA0AUZ9 987 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 OTOL1A6NHN0 477 aaPredicted RBP22■■□□□ 1.11
SHCBP1-205ENST00000566016 SHISA7A6NL88 538 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 PDGFBP01127 241 aaPredicted RBP22■■□□□ 1.11
SHCBP1-205ENST00000566016 IRF1P10914 325 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 CTHP32929 405 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 CLCN5P51795 746 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 SLC6A3Q01959 620 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 TRIP4Q15650 581 aaPredicted RBP22■■□□□ 1.11
SHCBP1-205ENST00000566016 CLEC16AQ2KHT3 1053 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 CWF19L1Q69YN2 538 aaKnown RBP22■■□□□ 1.11
SHCBP1-205ENST00000566016 PPP1R2P3Q6NXS1 205 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 ZNF852Q6ZMS4 543 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 GAS2L3Q86XJ1 694 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 VSTM4Q8IW00 320 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 ADGRG2Q8IZP9 1017 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 CPA5Q8WXQ8 436 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 SLC2A13Q96QE2 648 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 OSBPL6Q9BZF3 934 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 LINC00597Q9H2U6 94 aa22■■□□□ 1.11
SHCBP1-205ENST00000566016 MRPS17Q9Y2R5 130 aaKnown RBP22■■□□□ 1.11
SHCBP1-205ENST00000566016 LUC7L2Q9Y383 392 aaKnown RBP22■■□□□ 1.11
SHCBP1-205ENST00000566016 SLC12A8A0AV02 714 aa21.99■■□□□ 1.11
SHCBP1-205ENST00000566016 SPECC1L-ADORA2AF8WAN1 911 aa21.99■■□□□ 1.11
SHCBP1-205ENST00000566016 IGLV3-27P01718 113 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms