RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 SIRT6Q8N6T7 355 aa6.49□□□□□ -1.37
LINC00557-201ENST00000563184 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.49□□□□□ -1.37
LINC00557-201ENST00000563184 MYRIPQ8NFW9 859 aa6.49□□□□□ -1.37
LINC00557-201ENST00000563184 OTUD7AQ8TE49 926 aaPredicted RBP6.49□□□□□ -1.37
LINC00557-201ENST00000563184 TBC1D20Q96BZ9 403 aa6.49□□□□□ -1.37
LINC00557-201ENST00000563184 MCRS1Q96EZ8 462 aa6.49□□□□□ -1.37
LINC00557-201ENST00000563184 LTV1Q96GA3 475 aaPredicted RBP6.49□□□□□ -1.37
LINC00557-201ENST00000563184 ISCA1Q9BUE6 129 aa6.49□□□□□ -1.37
LINC00557-201ENST00000563184 PABPC3Q9H361 631 aaKnown RBP6.49□□□□□ -1.37
LINC00557-201ENST00000563184 PACSIN3Q9UKS6 424 aa6.49□□□□□ -1.37
LINC00557-201ENST00000563184 ADAMTS5Q9UNA0 930 aa6.49□□□□□ -1.37
LINC00557-201ENST00000563184 GPR52Q9Y2T5 361 aa6.49□□□□□ -1.37
LINC00557-201ENST00000563184 FAM90A18PA6NE21 464 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 FAM90A16PA6NEW6 464 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 FAM90A9PA6NNJ1 464 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 FAM90A5PA8MXJ8 464 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 CES2O00748 559 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 ZNF213O14771 459 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 CA12O43570 354 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 ACTL6BO94805 426 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 FAM90A15PP0C7V4 464 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 FAM90A14PP0C7W9 464 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 NDUFB7P17568 137 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 DRD1P21728 446 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 GDF5P43026 501 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 DIO1P49895 249 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 CCT8P50990 548 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 SUMO2P61956 95 aaKnown RBP6.48□□□□□ -1.37
LINC00557-201ENST00000563184 PRKG1Q13976 671 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 TRIM60Q495X7 471 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 RNASE12Q5GAN4 147 aaKnown RBP6.48□□□□□ -1.37
LINC00557-201ENST00000563184 RINT1Q6NUQ1 792 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 NRSN1Q8IZ57 195 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 CLASRPQ8N2M8 674 aaKnown RBP6.48□□□□□ -1.37
LINC00557-201ENST00000563184 SCAMP5Q8TAC9 235 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 RSC1A1Q92681 617 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 PRR11Q96HE9 360 aaPredicted RBP6.48□□□□□ -1.37
LINC00557-201ENST00000563184 RTKNQ9BST9 563 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 SCAND2PQ9GZW5 306 aaPredicted RBP6.48□□□□□ -1.37
LINC00557-201ENST00000563184 PRDM8Q9NQV8 689 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 SRP68Q9UHB9 627 aaKnown RBP6.48□□□□□ -1.37
LINC00557-201ENST00000563184 AMFRQ9UKV5 643 aa6.48□□□□□ -1.37
LINC00557-201ENST00000563184 GXYLT2A0PJZ3 443 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 M0QZQ0 153 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 CYR61O00622 381 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 CREB3O43889 395 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 RPP40O75818 363 aaKnown RBP6.47□□□□□ -1.37
LINC00557-201ENST00000563184 PDE8BO95263 885 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 FGAP02671 866 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 ADRA1DP25100 572 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 AKT1P31749 480 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 EEFSECP57772 596 aaKnown RBP6.47□□□□□ -1.37
LINC00557-201ENST00000563184 TIGD6Q17RP2 521 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 BTBD16Q32M84 506 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 C4orf46Q504U0 113 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 AARS2Q5JTZ9 985 aaKnown RBP6.47□□□□□ -1.37
LINC00557-201ENST00000563184 L1TD1Q5T7N2 865 aaKnown RBP6.47□□□□□ -1.37
LINC00557-201ENST00000563184 CCDC144NLQ6NUI1 221 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 KLHL17Q6TDP4 642 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 SLC44A2Q8IWA5 706 aaPredicted RBP6.47□□□□□ -1.37
LINC00557-201ENST00000563184 PAAF1Q9BRP4 392 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 DDX23Q9BUQ8 820 aaKnown RBP6.47□□□□□ -1.37
LINC00557-201ENST00000563184 SAP30LQ9HAJ7 183 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 DGKBQ9Y6T7 804 aa6.47□□□□□ -1.37
LINC00557-201ENST00000563184 A0A087X1B8 175 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 CTIFO43310 598 aaKnown RBP6.46□□□□□ -1.38
LINC00557-201ENST00000563184 TMPRSS11DO60235 418 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 CER1O95813 267 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 NPSP0C0P6 89 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 FAM163BP0C2L3 166 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 DHRS4L1P0CG22 281 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 CXCR5P32302 372 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 RENBPP51606 427 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 DGKQP52824 942 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 POLE2P56282 527 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 AP2B1P63010 937 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 LMAN2Q12907 356 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 CSHL1Q14406 222 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 PCID2Q5JVF3 399 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 MTHFD1LQ6UB35 978 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 RASAL3Q86YV0 1011 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 GALNT15Q8N3T1 639 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 SLC16A11Q8NCK7 471 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 ABHD11Q8NFV4 315 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 GPR150Q8NGU9 434 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 SLC22A17Q8WUG5 538 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 BBC3Q96PG8 261 aaPredicted RBP6.46□□□□□ -1.38
LINC00557-201ENST00000563184 MACROD1Q9BQ69 325 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 PAGR1Q9BTK6 254 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 PCED1AQ9H1Q7 454 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 ITM2CQ9NQX7 267 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 VPS45Q9NRW7 570 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 RXFP3Q9NSD7 469 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 MGAT4CQ9UBM8 478 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 DAPP1Q9UN19 280 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 ENTPD2Q9Y5L3 495 aa6.46□□□□□ -1.38
LINC00557-201ENST00000563184 GCOM1H8Y6P7 765 aaPredicted RBP6.45□□□□□ -1.38
LINC00557-201ENST00000563184 QSOX1O00391 747 aa6.45□□□□□ -1.38
LINC00557-201ENST00000563184 SUV39H1O43463 412 aa6.45□□□□□ -1.38
LINC00557-201ENST00000563184 ORC4O43929 436 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms