RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 TBC1D13Q9NVG8 400 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 COX16Q9P0S2 106 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 DNAJB4Q9UDY4 337 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 AP4E1Q9UPM8 1137 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 NAALADL1Q9UQQ1 740 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 MCF2LO15068 1137 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 RBP3P10745 1247 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 CHRM1P11229 460 aaPredicted RBP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 EIF3BP55884 814 aaKnown RBP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 DAOAP59103 153 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 NOMO1Q15155 1222 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 TCTN1Q2MV58 587 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 KRT71Q3SY84 523 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 SLC9A4Q6AI14 798 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 BNIPLQ7Z465 357 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 RSAD2Q8WXG1 361 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 FAF2Q96CS3 445 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 KCTD15Q96SI1 283 aaPredicted RBP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 NPY6RQ99463 290 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 ZNF670Q9BS34 389 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 FTHL17Q9BXU8 183 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 PAK6Q9NQU5 681 aaPredicted RBP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 TPX2Q9ULW0 747 aaKnown RBP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 HMGB1P1B2RPK0 211 aaPredicted RBP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 ENPP3O14638 875 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 APOL1O14791 398 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 FBXO21O94952 628 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 MAP3K6O95382 1288 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 ACSL3O95573 720 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 CYP2F1P24903 491 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 NOS2P35228 1153 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 OR1G1P47890 313 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 MNAT1P51948 309 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 RNASELQ05823 741 aaKnown RBP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 RNASEH2BQ5TBB1 312 aaKnown RBP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 TRMT10CQ7L0Y3 403 aaKnown RBP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 BHLHA9Q7RTU4 235 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 ZCCHC9Q8N567 271 aaKnown RBP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 URGCPQ8TCY9 931 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 CNGB3Q9NQW8 809 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 PSD3Q9NYI0 1048 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 BCCIPQ9P287 314 aaKnown RBP eCLIP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 FZD10Q9ULW2 581 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 PRG3Q9Y2Y8 225 aaPredicted RBP9.79□□□□□ -0.84
LINC00838-201ENST00000562956 HEY1Q9Y5J3 304 aa9.79□□□□□ -0.84
LINC00838-201ENST00000562956 DCDC2CA8MYV0 355 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 M0QYT0 321 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 PQBP1O60828 265 aaKnown RBP9.78□□□□□ -0.84
LINC00838-201ENST00000562956 ZBED1O96006 694 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 PAX3P23760 479 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 RPL22P35268 128 aaKnown RBP9.78□□□□□ -0.84
LINC00838-201ENST00000562956 PSEN1P49768 467 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 BCAR1P56945 870 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 ROR1Q01973 937 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 NME3Q13232 169 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 BFSP2Q13515 415 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 KYNUQ16719 465 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 PLEKHG4Q58EX7 1191 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 DARS2Q6PI48 645 aaKnown RBP9.78□□□□□ -0.84
LINC00838-201ENST00000562956 VSIG1Q86XK7 387 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 THEM5Q8N1Q8 247 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 TAB3Q8N5C8 712 aaPredicted RBP9.78□□□□□ -0.84
LINC00838-201ENST00000562956 ADAM32Q8TC27 787 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 LRRN4Q8WUT4 740 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 NRDE2Q9H7Z3 1164 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 PIGVQ9NUD9 493 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 TMEM161AQ9NX61 479 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 PCDHB8Q9UN66 801 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 FRMPD3Q5JV73 1810 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 OR4Q2P0C623 313 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 TYMPP19971 482 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 TGM2P21980 687 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 CTCFP49711 727 aaPredicted RBP9.78□□□□□ -0.84
LINC00838-201ENST00000562956 GATMP50440 423 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 CORO7P57737 925 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 YWHAHQ04917 246 aaPredicted RBP9.78□□□□□ -0.84
LINC00838-201ENST00000562956 FBXW10Q5XX13 1052 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 TTC19Q6DKK2 380 aaPredicted RBP9.78□□□□□ -0.84
LINC00838-201ENST00000562956 CSPG4P5Q96PW8 444 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 RBM15Q96T37 977 aaKnown RBP eCLIP9.78□□□□□ -0.84
LINC00838-201ENST00000562956 STAP1Q9ULZ2 295 aa9.78□□□□□ -0.84
LINC00838-201ENST00000562956 SMIM23A6NLE4 172 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 ZNF487B1APH4 448 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 H7C0C1 242 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 CAPN9O14815 690 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 TTC4O95801 387 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 NCAM1P13591 858 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 GOT1P17174 413 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 NR1D1P20393 614 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 RDXP35241 583 aaKnown RBP9.77□□□□□ -0.84
LINC00838-201ENST00000562956 ATP5OP48047 213 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 ATP1A2P50993 1020 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 MORF4L2Q15014 288 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 SLC7A14Q8TBB6 771 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 EPS8L3Q8TE67 593 aaKnown RBP9.77□□□□□ -0.84
LINC00838-201ENST00000562956 RNF208Q9H0X6 261 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 DMAP1Q9NPF5 467 aaPredicted RBP9.77□□□□□ -0.84
LINC00838-201ENST00000562956 NINJ2Q9NZG7 142 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 KANSL3Q9P2N6 904 aa9.77□□□□□ -0.84
LINC00838-201ENST00000562956 MFHAS1Q9Y4C4 1052 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms