RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 TRIB1Q96RU8 372 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 DMRTA2Q96SC8 542 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 VKORC1Q9BQB6 163 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 PIH1D3Q9NQM4 214 aaKnown RBP5.44□□□□□ -1.54
SMG1-206ENST00000562668 STAP2Q9UGK3 403 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 SERPINB13Q9UIV8 391 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 GAKO14976 1311 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 SIPA1L1O43166 1804 aa5.44□□□□□ -1.54
SMG1-206ENST00000562668 WDR27A2RRH5 827 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 WIPF3A6NGB9 483 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 URI1O94763 535 aaPredicted RBP5.43□□□□□ -1.54
SMG1-206ENST00000562668 IFIT2P09913 472 aaKnown RBP5.43□□□□□ -1.54
SMG1-206ENST00000562668 MMP14P50281 582 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 MTMR1Q13613 665 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 UAP1L1Q3KQV9 507 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 CCDC158Q5M9N0 1113 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 TTC39AQ5SRH9 613 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 ANKRD45Q5TZF3 282 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 APOBEC3HQ6NTF7 200 aaKnown RBP5.43□□□□□ -1.54
SMG1-206ENST00000562668 AMIGO2Q86SJ2 522 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 ADGRA1Q86SQ6 560 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 CHD1LQ86WJ1 897 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 PDSS2Q86YH6 399 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 HASPINQ8TF76 798 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 TBC1D22AQ8WUA7 517 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 SCAMP4Q969E2 229 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 MTMR8Q96EF0 704 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 EDC3Q96F86 508 aaKnown RBP5.43□□□□□ -1.54
SMG1-206ENST00000562668 PRMT6Q96LA8 375 aaPredicted RBP5.43□□□□□ -1.54
SMG1-206ENST00000562668 MYOZ2Q9NPC6 264 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 MAN1C1Q9NR34 630 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 ECHDC1Q9NTX5 307 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 GNL3LQ9NVN8 582 aaKnown RBP5.43□□□□□ -1.54
SMG1-206ENST00000562668 RLIMQ9NVW2 624 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 WNT6Q9Y6F9 365 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 TTC41PQ6P2S7 1318 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 PASKQ96RG2 1323 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 TRPM7Q96QT4 1865 aa5.43□□□□□ -1.54
SMG1-206ENST00000562668 SSC5DA1L4H1 1573 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 A0A0B4J269 797 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 DNAJC9-AS1A6NH13 148 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 GCOM1H8Y6P7 765 aaPredicted RBP5.42□□□□□ -1.54
SMG1-206ENST00000562668 F2RL2O00254 374 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 IGSF3O75054 1194 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 TOMM70O94826 608 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 MX1P20591 662 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 MALP21145 153 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 ITPKBP27987 946 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 ABCG1P45844 678 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 GUCY2FP51841 1108 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 PDE1AP54750 535 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 ADKP55263 362 aaKnown RBP5.42□□□□□ -1.54
SMG1-206ENST00000562668 RHBDL3P58872 404 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 MECOMQ03112 1051 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 TUBB3Q13509 450 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 GORABQ5T7V8 394 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 DLK2Q6UY11 383 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 TTC7BQ86TV6 843 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 PNMA8AQ86V59 439 aaPredicted RBP5.42□□□□□ -1.54
SMG1-206ENST00000562668 SKAP1Q86WV1 359 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 POC1BQ8TC44 478 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 PBKQ96KB5 322 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 BOLA2Q9H3K6 86 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 KLC4Q9NSK0 619 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 SIDT1Q9NXL6 827 aaKnown RBP5.42□□□□□ -1.54
SMG1-206ENST00000562668 AK9Q5TCS8 1911 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 ADGRA2Q96PE1 1338 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 LAMB1P07942 1786 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 CNTNAP1P78357 1384 aa5.42□□□□□ -1.54
SMG1-206ENST00000562668 GPR75-ASB3A0A0A6YYF3 556 aa5.41□□□□□ -1.54
SMG1-206ENST00000562668 MANSC4A6NHS7 340 aaPredicted RBP5.41□□□□□ -1.54
SMG1-206ENST00000562668 ZNF785A8K8V0 405 aa5.41□□□□□ -1.54
SMG1-206ENST00000562668 VWC2LB2RUY7 222 aa5.41□□□□□ -1.54
SMG1-206ENST00000562668 NT5C1B-RDH14C9J2C7 533 aa5.41□□□□□ -1.54
SMG1-206ENST00000562668 GABRDO14764 452 aa5.41□□□□□ -1.54
SMG1-206ENST00000562668 CDKN1CP49918 316 aaPredicted RBP5.41□□□□□ -1.54
SMG1-206ENST00000562668 SRSF4Q08170 494 aaKnown RBP5.41□□□□□ -1.54
SMG1-206ENST00000562668 ITKQ08881 620 aa5.41□□□□□ -1.54
SMG1-206ENST00000562668 PCBP2Q15366 365 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMG1-206ENST00000562668 CENPQQ7L2Z9 268 aaPredicted RBP5.41□□□□□ -1.54
SMG1-206ENST00000562668 NAF1Q96HR8 494 aaKnown RBP5.41□□□□□ -1.54
SMG1-206ENST00000562668 VRK1Q99986 396 aaPredicted RBP5.41□□□□□ -1.54
SMG1-206ENST00000562668 BRD9Q9H8M2 597 aa5.41□□□□□ -1.54
SMG1-206ENST00000562668 PAG1Q9NWQ8 432 aa5.41□□□□□ -1.54
SMG1-206ENST00000562668 ETAA1Q9NY74 926 aa5.41□□□□□ -1.54
SMG1-206ENST00000562668 CFAP97Q9P2B7 532 aa5.41□□□□□ -1.54
SMG1-206ENST00000562668 ADAM21Q9UKJ8 722 aa5.41□□□□□ -1.54
SMG1-206ENST00000562668 SCAF8Q9UPN6 1271 aaKnown RBP5.41□□□□□ -1.54
SMG1-206ENST00000562668 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.41□□□□□ -1.54
SMG1-206ENST00000562668 OTOFQ9HC10 1997 aa5.41□□□□□ -1.54
SMG1-206ENST00000562668 MROH7-TTC4A0A0A0MT08 1334 aa5.41□□□□□ -1.54
SMG1-206ENST00000562668 GOLIM4O00461 696 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 FRAT2O75474 233 aaPredicted RBP5.4□□□□□ -1.54
SMG1-206ENST00000562668 WDHD1O75717 1129 aaPredicted RBP5.4□□□□□ -1.54
SMG1-206ENST00000562668 CHEK2O96017 543 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 RHOP08100 348 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 LPOP22079 712 aaPredicted RBP5.4□□□□□ -1.54
SMG1-206ENST00000562668 CYP2C19P33261 490 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 ADD2P35612 726 aa5.4□□□□□ -1.54
SMG1-206ENST00000562668 NDUFV1P49821 464 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms