RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ELSPBP1Q96BH3 223 aa10.25□□□□□ -0.77
CLK3-208ENST00000562626 C18orf8Q96DM3 657 aa10.25□□□□□ -0.77
CLK3-208ENST00000562626 IQCDQ96DY2 449 aa10.25□□□□□ -0.77
CLK3-208ENST00000562626 TDP1Q9NUW8 608 aa10.25□□□□□ -0.77
CLK3-208ENST00000562626 ADAMTS1Q9UHI8 967 aa10.25□□□□□ -0.77
CLK3-208ENST00000562626 RASAL2Q9UJF2 1139 aa10.25□□□□□ -0.77
CLK3-208ENST00000562626 ARHGAP26Q9UNA1 814 aa10.25□□□□□ -0.77
CLK3-208ENST00000562626 ZFP37Q9Y6Q3 630 aaPredicted RBP10.25□□□□□ -0.77
CLK3-208ENST00000562626 SHROOM3Q8TF72 1996 aa10.25□□□□□ -0.77
CLK3-208ENST00000562626 F5P12259 2224 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 OTOL1A6NHN0 477 aaPredicted RBP10.24□□□□□ -0.77
CLK3-208ENST00000562626 SHISA7A6NL88 538 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 ARNTLO00327 626 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 FBXO21O94952 628 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 KLKB1P03952 638 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 HMBSP08397 361 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 RRM1P23921 792 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 CDC25BP30305 580 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 FLT3P36888 993 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 AVPR1AP37288 418 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 PSEN1P49768 467 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 GFPT1Q06210 699 aaPredicted RBP10.24□□□□□ -0.77
CLK3-208ENST00000562626 ZNF268Q14587 947 aaPredicted RBP10.24□□□□□ -0.77
CLK3-208ENST00000562626 MTF1Q14872 753 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 BTBD8Q5XKL5 378 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 TRIM68Q6AZZ1 485 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 ACAD10Q6JQN1 1059 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 MSANTD2Q6P1R3 559 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 SLC26A9Q7LBE3 791 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 TAC4Q86UU9 113 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 MIB1Q86YT6 1006 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 TMEM139Q8IV31 216 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 MCOLN2Q8IZK6 566 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 DEFB106AQ8N104 65 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 PLCD3Q8N3E9 789 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 ZNF276Q8N554 614 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 ZNF397Q8NF99 534 aaPredicted RBP10.24□□□□□ -0.77
CLK3-208ENST00000562626 DQX1Q8TE96 717 aaKnown RBP10.24□□□□□ -0.77
CLK3-208ENST00000562626 IPO4Q8TEX9 1081 aaKnown RBP10.24□□□□□ -0.77
CLK3-208ENST00000562626 FAM149B1Q96BN6 582 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 CHFRQ96EP1 664 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 SLC2A13Q96QE2 648 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 PACSIN1Q9BY11 444 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 NUCKS1Q9H1E3 243 aaKnown RBP10.24□□□□□ -0.77
CLK3-208ENST00000562626 LINC00597Q9H2U6 94 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 ZFP14Q9HCL3 533 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 HPS4Q9NQG7 708 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 METTL5Q9NRN9 209 aaKnown RBP10.24□□□□□ -0.77
CLK3-208ENST00000562626 ADAM22Q9P0K1 906 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 CFAP97Q9P2B7 532 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 TMEM59LQ9UK28 342 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 CEP83Q9Y592 693 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 WNT6Q9Y6F9 365 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 EML5Q05BV3 1969 aa10.24□□□□□ -0.77
CLK3-208ENST00000562626 MUC22E2RYF6 1773 aaPredicted RBP10.24□□□□□ -0.77
CLK3-208ENST00000562626 SLC12A8A0AV02 714 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 GOLGA6L3A6NEY3 463 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 SOBPA7XYQ1 873 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 I6L893 689 aaPredicted RBP10.23□□□□□ -0.77
CLK3-208ENST00000562626 DAB1O75553 588 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 STC2O76061 302 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 IGLV3-25P01717 112 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 CCDC172P0C7W6 258 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 NCAM1P13591 858 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 ARSAP15289 507 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 FECHP22830 423 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 GDI1P31150 447 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 ATP5C1P36542 298 aaKnown RBP10.23□□□□□ -0.77
CLK3-208ENST00000562626 NSFP46459 744 aaKnown RBP10.23□□□□□ -0.77
CLK3-208ENST00000562626 ATXN1P54253 815 aaKnown RBP10.23□□□□□ -0.77
CLK3-208ENST00000562626 RNASE9P60153 205 aaKnown RBP10.23□□□□□ -0.77
CLK3-208ENST00000562626 RPL7AP62424 266 aaKnown RBP10.23□□□□□ -0.77
CLK3-208ENST00000562626 YWHAZP63104 245 aaKnown RBP10.23□□□□□ -0.77
CLK3-208ENST00000562626 GPC5P78333 572 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 OGDHQ02218 1023 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 TNK2Q07912 1038 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 FCHO2Q0JRZ9 810 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 MAPK8IP2Q13387 824 aaPredicted RBP10.23□□□□□ -0.77
CLK3-208ENST00000562626 EIF4EBP2Q13542 120 aaPredicted RBP10.23□□□□□ -0.77
CLK3-208ENST00000562626 PPP1R15BQ5SWA1 713 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 FAM102AQ5T9C2 384 aaPredicted RBP10.23□□□□□ -0.77
CLK3-208ENST00000562626 SH3PXD2AQ5TCZ1 1133 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 MTSS1LQ765P7 747 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 FMNL3Q8IVF7 1028 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 MFSD6LQ8IWD5 586 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 CELF5Q8N6W0 485 aaKnown RBP10.23□□□□□ -0.77
CLK3-208ENST00000562626 TTC8Q8TAM2 541 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 BPIFB1Q8TDL5 484 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 ARHGEF26Q96DR7 871 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 NOX5Q96PH1 765 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 FAM83CQ9BQN1 747 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLK3-208ENST00000562626 TRIM7Q9C029 511 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 ISCUQ9H1K1 167 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 SYNCQ9H7C4 482 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 ANLNQ9NQW6 1124 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 ABCC13Q9NSE7 274 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 SPTLC3Q9NUV7 552 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 MARCH2Q9P0N8 246 aa10.23□□□□□ -0.77
CLK3-208ENST00000562626 IGSF9Q9P2J2 1179 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms