RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 OTUB2Q96DC9 234 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 SLC2A13Q96QE2 648 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 SMG9Q9H0W8 520 aaKnown RBP10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 POPDC2Q9HBU9 364 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 TMEM51Q9NW97 253 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 THG1LQ9NWX6 298 aaKnown RBP10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 WDR35Q9P2L0 1181 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 CPQQ9Y646 472 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 ATG2BQ96BY7 2078 aa10.08□□□□□ -0.8
RABGGTA-221ENST00000561055 PIK3R2O00459 728 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 SLC9A3R1O14745 358 aaPredicted RBP10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 ZNF263O14978 683 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 NARSO43776 548 aaKnown RBP10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 HSF2BPO75031 334 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 MFAP3LO75121 409 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 GLULP15104 373 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 CDC25BP30305 580 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 CDK17Q00537 523 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 RING1Q06587 406 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 C1QBPQ07021 282 aaKnown RBP10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 SIGLEC14Q08ET2 396 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 NNTQ13423 1086 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 GRM2Q14416 872 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 MTF1Q14872 753 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 TRIP4Q15650 581 aaPredicted RBP10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 C10orf120Q5SQS8 335 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 ACAD10Q6JQN1 1059 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 TOGARAM2Q6ZUX3 1019 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 FAM183BPQ6ZVS7 135 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 GPIHBP1Q8IV16 184 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 CNGA4Q8IV77 575 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 GOLGA1Q92805 767 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 NT5C3BQ969T7 300 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 PIWIL1Q96J94 861 aaKnown RBP10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 ISCUQ9H1K1 167 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 GKN1Q9NS71 199 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 RRN3Q9NYV6 651 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 MARCH2Q9P0N8 246 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 TBC1D14Q9P2M4 693 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 TMEM59LQ9UK28 342 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 STRIP2Q9ULQ0 834 aa10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 HBS1LQ9Y450 684 aaKnown RBP10.07□□□□□ -0.8
RABGGTA-221ENST00000561055 CHD5Q8TDI0 1954 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 SSU72P8A0A1W2PR75 194 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 TCRBV5S1A1TA0A578 114 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 DDX3XO00571 662 aaKnown RBP eCLIP10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 RTN2O75298 545 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 STC2O76061 302 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 IGLV3-25P01717 112 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 IGLV3-27P01718 113 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 CALB1P05937 261 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 TPM1P09493 284 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 SKILP12757 684 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 NCAM1P13591 858 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 GDI1P31150 447 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 NOS2P35228 1153 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 NSFP46459 744 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 KPNA1P52294 538 aaPredicted RBP10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 GOLGA8FQ08AF8 430 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 GOLGA8DPQ0D2H9 430 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 MAPK8IP2Q13387 824 aaPredicted RBP10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 PDGFRLQ15198 375 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 EML3Q32P44 896 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 SYPL2Q5VXT5 272 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 OR6B2Q6IFH4 312 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 CC2D1AQ6P1N0 951 aaPredicted RBP10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 Q6ZNB5 142 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 MON1BQ7L1V2 547 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 RSRC2Q7L4I2 434 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 BMP8AQ7Z5Y6 402 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 YAF2Q8IY57 180 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 ADGRG2Q8IZP9 1017 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 ST13P5Q8NFI4 369 aaPredicted RBP10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 OSCP1Q8WVF1 389 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 EDEM1Q92611 657 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 AZIN2Q96A70 460 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 FAM149B1Q96BN6 582 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 PLD4Q96BZ4 506 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 PGAP3Q96FM1 320 aaPredicted RBP10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 ASIC4Q96FT7 647 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 DDX23Q9BUQ8 820 aaKnown RBP10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 DCLK3Q9C098 648 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 NACA2Q9H009 215 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 SMOC2Q9H3U7 446 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 SYNCQ9H7C4 482 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 BRD9Q9H8M2 597 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 ABHD10Q9NUJ1 306 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 ADAM22Q9P0K1 906 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 CFAP97Q9P2B7 532 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 ARHGAP20Q9P2F6 1191 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 STOML2Q9UJZ1 356 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 NUDT5Q9UKK9 219 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 NENFQ9UMX5 172 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 NAALADL1Q9UQQ1 740 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 ZNF510Q9Y2H8 683 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 KMT2EQ8IZD2 1858 aa10.06□□□□□ -0.8
RABGGTA-221ENST00000561055 AKR1B15C9JRZ8 316 aaPredicted RBP10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 MDM4O15151 490 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 DAB1O75553 588 aa10.05□□□□□ -0.8
RABGGTA-221ENST00000561055 LATS1O95835 1130 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms