RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 BTN3A3O00478 584 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 SNPHO15079 494 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 NCK2O43639 380 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 PTCD1O75127 700 aaKnown RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 SRP72O76094 671 aaKnown RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 IFNA7P01567 189 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 ZCCHC18P0CG32 403 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 EEF1B2P24534 225 aaKnown RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 COILP38432 576 aaPredicted RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 GP5P40197 560 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 CBX5P45973 191 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 PHKA2P46019 1235 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 DNA2P51530 1060 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 NR5A1Q13285 461 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 KNOP1Q1ED39 458 aaKnown RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 ANO4Q32M45 955 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 PABPC1LQ4VXU2 614 aaKnown RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 HSD17B12Q53GQ0 312 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 TNFAIP8L3Q5GJ75 292 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 RNASEH2BQ5TBB1 312 aaKnown RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 AGAP9Q5VTM2 703 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 TTC39BQ5VTQ0 682 aaPredicted RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 BICRALQ6AI39 1079 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 PAOXQ6QHF9 649 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 ABRAXAS1Q6UWZ7 409 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 LHFPL3Q86UP9 236 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 KIF18BQ86Y91 864 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 MICU2Q8IYU8 434 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 DCLK2Q8N568 766 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 FAM13CQ8NE31 585 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 KBTBD8Q8NFY9 601 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 USP13Q92995 863 aaPredicted RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 ZNF578Q96N58 590 aaPredicted RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 ZNF317Q96PQ6 595 aaPredicted RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 ZSWIM1Q9BR11 485 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 INO80BQ9C086 356 aaPredicted RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 RACGAP1Q9H0H5 632 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 ING2Q9H160 280 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 ADNPQ9H2P0 1102 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 KLHL31Q9H511 634 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 CCNB1IP1Q9NPC3 277 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 AGPAT5Q9NUQ2 364 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 PKD2L1Q9P0L9 805 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 STOX2Q9P2F5 926 aaPredicted RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 PPARGC1AQ9UBK2 798 aaKnown RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 RAPGEFL1Q9UHV5 662 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 SERPINA10Q9UK55 444 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 SOX13Q9UN79 622 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 POLIQ9UNA4 740 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 NFS1Q9Y697 457 aa2.46□□□□□ -2.02
RGPD1-204ENST00000559485 MN1Q10571 1320 aaPredicted RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 MYO5AQ9Y4I1 1855 aaKnown RBP2.46□□□□□ -2.02
RGPD1-204ENST00000559485 NOP56O00567 594 aaKnown RBP2.45□□□□□ -2.02
RGPD1-204ENST00000559485 COPEO14579 308 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 KIAA0391O15091 583 aaKnown RBP2.45□□□□□ -2.02
RGPD1-204ENST00000559485 MUSKO15146 869 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 FANCGO15287 622 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 ALOX15BO15296 676 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 CYP27B1O15528 508 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 ARHGEF15O94989 841 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 ANXA1P04083 346 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 APOA4P06727 396 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 FGRP09769 529 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 GZMAP12544 262 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 ZNF3P17036 446 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 RASA1P20936 1047 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 RPA1P27694 616 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 PMLP29590 882 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 CXCR5P32302 372 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 NSFP46459 744 aaKnown RBP2.45□□□□□ -2.02
RGPD1-204ENST00000559485 APLP1P51693 650 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 VCPP55072 806 aaKnown RBP2.45□□□□□ -2.02
RGPD1-204ENST00000559485 CASP7P55210 303 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 YWHAGP61981 247 aaKnown RBP eCLIP2.45□□□□□ -2.02
RGPD1-204ENST00000559485 TIMM10P62072 90 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 KCNJ2P63252 427 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 KRT17Q04695 432 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 VAC14Q08AM6 782 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 CYP1B1Q16678 543 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 ASTE1Q2TB18 679 aaPredicted RBP2.45□□□□□ -2.02
RGPD1-204ENST00000559485 SNRNP48Q6IEG0 339 aaKnown RBP2.45□□□□□ -2.02
RGPD1-204ENST00000559485 STYK1Q6J9G0 422 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 RRM2BQ7LG56 351 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 CATSPER3Q86XQ3 398 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 GATAD2AQ86YP4 633 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 ARMC8Q8IUR7 673 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 GRAMD2AQ8IUY3 354 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 CHERPQ8IWX8 916 aaKnown RBP2.45□□□□□ -2.02
RGPD1-204ENST00000559485 TIGD4Q8IY51 512 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 ULK2Q8IYT8 1036 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 ZNF34Q8IZ26 560 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 FAM109AQ8N4B1 249 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 SETD9Q8NE22 299 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 OR8K5Q8NH50 307 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 SNIP1Q8TAD8 396 aaKnown RBP2.45□□□□□ -2.02
RGPD1-204ENST00000559485 C18orf8Q96DM3 657 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 ZNF486Q96H40 463 aaPredicted RBP2.45□□□□□ -2.02
RGPD1-204ENST00000559485 TBATAQ96M53 351 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 ORAI2Q96SN7 254 aa2.45□□□□□ -2.02
RGPD1-204ENST00000559485 PSMB7Q99436 277 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms