RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 RAB23Q9ULC3 237 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 RNF123Q5XPI4 1314 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 H3BN98 237 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 CRTAMO95727 393 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 BMT2Q1RMZ1 405 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 SMYD4Q8IYR2 804 aaPredicted RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 HS6ST3Q8IZP7 471 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 NSMCE2Q96MF7 247 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 ISCUQ9H1K1 167 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 PCIF1Q9H4Z3 704 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 SCGNO76038 276 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 HIST1H2ABP04908 130 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 TPBGLP0DKB5 382 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 AMPD2Q01433 879 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 LPIN1Q14693 890 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 MTHFSDQ2M296 383 aaKnown RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 IZUMO2Q6UXV1 221 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 HIST3H2AQ7L7L0 130 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 TMPRSS6Q8IU80 811 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 HIST1H2ACQ93077 130 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 ATXN7L3BQ96GX2 97 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 RPRD1AQ96P16 312 aaPredicted RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 HBS1LQ9Y450 684 aaKnown RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 LIN7AO14910 233 aaPredicted RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 TRIM66O15016 1216 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 NFKB1P19838 968 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 IST1P53990 364 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 C8orf59Q8N0T1 100 aaPredicted RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 UTP15Q8TED0 518 aaKnown RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 NECTIN3Q9NQS3 549 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 CHST10O43529 356 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 HNRNPH1P31943 449 aaKnown RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 SLC26A3P40879 764 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 PEX3P56589 373 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 PWP1Q13610 501 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 FRMD6Q96NE9 622 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 TLR7Q9NYK1 1049 aaKnown RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 FOSL1P15407 271 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 DNAJB2P25686 324 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 BIKQ13323 160 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 UBE2Q1Q7Z7E8 422 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 SPATA2LQ8IUW3 424 aaPredicted RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 ADGRG1Q9Y653 693 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 ABCC10Q5T3U5 1492 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 GYS1P13807 737 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 PTPN7P35236 360 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 CDC16Q13042 620 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 ZNF655Q8N720 491 aaPredicted RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 TSPAN14Q8NG11 270 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 CKAP2Q8WWK9 683 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 KCNB2Q92953 911 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 FAM213AQ9BRX8 229 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 SPON2Q9BUD6 331 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 C12orf4Q9NQ89 552 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 ZNF232Q9UNY5 417 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 ANKARQ7Z5J8 1434 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 A0A1W2PQJ5 194 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 H7C1W4 665 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 ZBTB5O15062 677 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 PGK1P00558 417 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 NR1H2P55055 460 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 ROR2Q01974 943 aaKnown RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 PTGISQ16647 500 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 Q4G0T1 1027 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 IRGCQ6NXR0 463 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 TMEM179Q6ZVK1 233 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 MYO1HQ8N1T3 1032 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 UBE2E3Q969T4 207 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 CLN6Q9NWW5 311 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 CRLS1Q9UJA2 301 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 CDH9Q9ULB4 789 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 EEF2KO00418 725 aaKnown RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 ATP9BO43861 1147 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 TARSP26639 723 aaKnown RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 NAB1Q13506 487 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 LRRC74BQ6ZQY2 392 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 FAM120BQ96EK7 910 aaKnown RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 QRFPRQ96P65 431 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 SLC39A8Q9C0K1 460 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 COPRSQ9NQ92 184 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 NUDT5Q9UKK9 219 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 DYRK1BQ9Y463 629 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 ZNF804BA4D1E1 1349 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 RB1P06400 928 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 PNPLA4P41247 253 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 SCTRP47872 440 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 PDX1P52945 283 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 PTSQ03393 145 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 RASGRP2Q7LDG7 609 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 DDX53Q86TM3 631 aaKnown RBP9.07□□□□□ -0.96
SYNE3-205ENST00000557275 FAR1Q8WVX9 515 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 CAPSLQ8WWF8 208 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 CLPBQ9H078 707 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 MEMO1Q9Y316 297 aa9.07□□□□□ -0.96
SYNE3-205ENST00000557275 UGT1A5P35504 534 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 MCCD1P59942 119 aaPredicted RBP9.06□□□□□ -0.96
SYNE3-205ENST00000557275 Q3C1V9 767 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 SUN5Q8TC36 379 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 C15orf40Q8WUR7 153 aa9.06□□□□□ -0.96
SYNE3-205ENST00000557275 SLITRK1Q96PX8 696 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms