RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 EDNRBP24530 442 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 ANXA13P27216 316 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 CASP5P51878 434 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 GTF2BQ00403 316 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 DBPQ10586 325 aaPredicted RBP4.82□□□□□ -1.64
SRP54-212ENST00000556992 KIF5AQ12840 1032 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 PPP2R5AQ15172 486 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 WDR72Q3MJ13 1102 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 SLC9C1Q4G0N8 1177 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 ARHGAP29Q52LW3 1261 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 ZC2HC1CQ53FD0 456 aaPredicted RBP4.82□□□□□ -1.64
SRP54-212ENST00000556992 FAM102BQ5T8I3 360 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 SFMBT2Q5VUG0 894 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 YOD1Q5VVQ6 348 aaPredicted RBP4.82□□□□□ -1.64
SRP54-212ENST00000556992 FAM160B1Q5W0V3 765 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 TRIM65Q6PJ69 517 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 WDR59Q6PJI9 974 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 DLK2Q6UY11 383 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 GBP6Q6ZN66 633 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 ANO5Q75V66 913 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 RRAGAQ7L523 313 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 HAUS6Q7Z4H7 955 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 MTERF4Q7Z6M4 381 aaKnown RBP4.82□□□□□ -1.64
SRP54-212ENST00000556992 USP37Q86T82 979 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 LDLRAD3Q86YD5 345 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 C12orf56Q8IXR9 622 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 FAM186BQ8IYM0 893 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 C2orf69Q8N8R5 385 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 FAM133AQ8N9E0 248 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 GPRC5AQ8NFJ5 357 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 SEPT1Q8WYJ6 367 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 CFHR4Q92496 578 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 OPTNQ96CV9 577 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 HVCN1Q96D96 273 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 TMEM176AQ96HP8 235 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 CLMNQ96JQ2 1002 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 CEP170P1Q96L14 293 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 IFT74Q96LB3 600 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 EIF3CQ99613 913 aaKnown RBP4.82□□□□□ -1.64
SRP54-212ENST00000556992 FGFBP2Q9BYJ0 223 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 TSGA10Q9BZW7 698 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 TTYH3Q9C0H2 523 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 HAUS4Q9H6D7 363 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 POLD4Q9HCU8 107 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 AGPAT3Q9NRZ7 376 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 AGPAT5Q9NUQ2 364 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 KIAA1522Q9P206 1035 aaPredicted RBP4.82□□□□□ -1.64
SRP54-212ENST00000556992 CEP72Q9P209 647 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 FBXL5Q9UKA1 691 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 MYO6Q9UM54 1294 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 DLEC1Q9Y238 1755 aa4.82□□□□□ -1.64
SRP54-212ENST00000556992 NAV1Q8NEY1 1877 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 LAMB1P07942 1786 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 IGKV6D-21A0A0A0MT36 114 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 CTAGE9A4FU28 777 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 ASB14A6NK59 587 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 FAM90A27PA6NNH2 459 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 CCDC169A6NNP5 214 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 AGRPO00253 132 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 KCNK3O14649 394 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 KIAA0391O15091 583 aaKnown RBP4.81□□□□□ -1.64
SRP54-212ENST00000556992 CLIC2O15247 247 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 P4HA2O15460 535 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 KRT86O43790 486 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 AKR1B10O60218 316 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 CNMDO75829 334 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 URI1O94763 535 aaPredicted RBP4.81□□□□□ -1.64
SRP54-212ENST00000556992 STBD1O95210 358 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 SLU7O95391 586 aaKnown RBP4.81□□□□□ -1.64
SRP54-212ENST00000556992 LCA5LO95447 670 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 SERPING1P05155 500 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 ACRV1P26436 265 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 MC4RP32245 332 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 GCLCP48506 637 aaPredicted RBP4.81□□□□□ -1.64
SRP54-212ENST00000556992 KLK7P49862 253 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 SLC26A2P50443 739 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 ALDH5A1P51649 535 aaPredicted RBP4.81□□□□□ -1.64
SRP54-212ENST00000556992 EPHA5P54756 1037 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 NPEPPSP55786 919 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 PEX3P56589 373 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 POLR2FP61218 127 aaKnown RBP4.81□□□□□ -1.64
SRP54-212ENST00000556992 IL13RA1P78552 427 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 SP2Q02086 613 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 CNTN2Q02246 1040 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 ENPEPQ07075 957 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 MAPK7Q13164 816 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 DMP1Q13316 513 aaPredicted RBP4.81□□□□□ -1.64
SRP54-212ENST00000556992 MOGSQ13724 837 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 TUBA3CQ13748 450 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 MTF1Q14872 753 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 EXOC3L4Q17RC7 722 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 KIZQ2M2Z5 673 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 BRDTQ58F21 947 aaPredicted RBP4.81□□□□□ -1.64
SRP54-212ENST00000556992 C10orf76Q5T2E6 689 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 UTP14CQ5TAP6 766 aaKnown RBP4.81□□□□□ -1.64
SRP54-212ENST00000556992 KLHDC7AQ5VTJ3 777 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 BTBD8Q5XKL5 378 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 PDXDC1Q6P996 788 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 TUBA3EQ6PEY2 450 aa4.81□□□□□ -1.64
SRP54-212ENST00000556992 SEPT14Q6ZU15 432 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms