RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 EIF2DP41214 584 aaKnown RBP7.71□□□□□ -1.17
SCFD1-222ENST00000556768 PLA2G4AP47712 749 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 FNTBP49356 437 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 FOXK2Q01167 660 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 GAD2Q05329 585 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 CUL2Q13617 745 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 DHCR24Q15392 516 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 TSNAXIP1Q2TAA8 658 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 ANO4Q32M45 955 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 SGO2Q562F6 1265 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 C10orf120Q5SQS8 335 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 PPP1R26Q5T8A7 1209 aaPredicted RBP7.71□□□□□ -1.17
SCFD1-222ENST00000556768 LAIR1Q6GTX8 287 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 FSTL4Q6MZW2 842 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 FOXR2Q6PJQ5 311 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 RSRC2Q7L4I2 434 aaKnown RBP7.71□□□□□ -1.17
SCFD1-222ENST00000556768 CREBRFQ8IUR6 639 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 TRIML1Q8N9V2 468 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 TSEN2Q8NCE0 465 aaKnown RBP7.71□□□□□ -1.17
SCFD1-222ENST00000556768 RPLP0P6Q8NHW5 317 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 NELFBQ8WX92 580 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 IPO9Q96P70 1041 aaKnown RBP7.71□□□□□ -1.17
SCFD1-222ENST00000556768 PNKPQ96T60 521 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 UBXN6Q9BZV1 441 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 CCSER2Q9H7U1 834 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 DEC1Q9P2X7 70 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 MAN1B1Q9UKM7 699 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 COQ4Q9Y3A0 265 aa7.71□□□□□ -1.17
SCFD1-222ENST00000556768 PDCD11Q14690 1871 aaKnown RBP7.71□□□□□ -1.18
SCFD1-222ENST00000556768 TRIM49BA6NDI0 452 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 TBC1D3BA6NDS4 549 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 BIN1O00499 593 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 P4HA2O15460 535 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 BEST1O76090 585 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 ALDH1A2O94788 518 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 RETP07949 1114 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 ZDHHC11BP0C7U3 371 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 ADH5P11766 374 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 CD19P15391 556 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 GRIA2P42262 883 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 ID4P47928 161 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 FMO5P49326 533 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 KIF11P52732 1056 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 PMS1P54277 932 aaKnown RBP7.71□□□□□ -1.18
SCFD1-222ENST00000556768 COG7P83436 770 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 ZXDBP98169 803 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 PAK1Q13153 545 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 CBWD6Q4V339 395 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 C2orf27AQ580R0 203 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 CBWD3Q5JTY5 395 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 CBWD5Q5RIA9 395 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 KLHDC10Q6PID8 442 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 RHBDF2Q6PJF5 856 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 SYT13Q7L8C5 426 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.71□□□□□ -1.18
SCFD1-222ENST00000556768 PPM1KQ8N3J5 372 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 ANKRD52Q8NB46 1076 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 ANKK1Q8NFD2 765 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 RIN3Q8TB24 985 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 SEMA4DQ92854 862 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 SLC35C1Q96A29 364 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 COL26A1Q96A83 441 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 NT5C1BQ96P26 610 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 XPO6Q96QU8 1125 aaKnown RBP7.71□□□□□ -1.18
SCFD1-222ENST00000556768 TWNKQ96RR1 684 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 LRRC4Q9HBW1 653 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 FBRSL1Q9HCM7 1045 aaKnown RBP7.71□□□□□ -1.18
SCFD1-222ENST00000556768 CYLDQ9NQC7 956 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 ARHGEF4Q9NR80 690 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 CLIC5Q9NZA1 410 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 WDR35Q9P2L0 1181 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 TSR3Q9UJK0 312 aaKnown RBP7.71□□□□□ -1.18
SCFD1-222ENST00000556768 STRIP2Q9ULQ0 834 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 USP18Q9UMW8 372 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 ZNF510Q9Y2H8 683 aa7.71□□□□□ -1.18
SCFD1-222ENST00000556768 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.71□□□□□ -1.18
SCFD1-222ENST00000556768 DNAH14Q0VDD8 3507 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 KMT2EQ8IZD2 1858 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 PRR5-ARHGAP8B1AHC4 643 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 K7ESF4 209 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 SCAMP3O14828 347 aaKnown RBP7.7□□□□□ -1.18
SCFD1-222ENST00000556768 PMM2O15305 246 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 CYP26A1O43174 497 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 RPP40O75818 363 aaKnown RBP7.7□□□□□ -1.18
SCFD1-222ENST00000556768 APBB3O95704 486 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 TBX18O95935 607 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 CYP17A1P05093 508 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 IRF1P10914 325 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 RARGP13631 454 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 CHKAP35790 457 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 TNFRSF4P43489 277 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 BCAT1P54687 386 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 RAD23BP54727 409 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 MRPS21P82921 87 aaKnown RBP7.7□□□□□ -1.18
SCFD1-222ENST00000556768 ARHGAP8P85298 464 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 LMNB2Q03252 620 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 LRMPQ12912 555 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 MORC3Q14149 939 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 DMC1Q14565 340 aa7.7□□□□□ -1.18
SCFD1-222ENST00000556768 STILQ15468 1287 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms