RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 KLF16Q9BXK1 252 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-225ENST00000551845 CNTNAP3Q9BZ76 1288 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 LINC00597Q9H2U6 94 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 SYNCQ9H7C4 482 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 C8orf33Q9H7E9 229 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-225ENST00000551845 ARHGEF3Q9NR81 526 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 HEBP1Q9NRV9 189 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 OLA1Q9NTK5 396 aaKnown RBP11.13□□□□□ -0.63
PTCH1-225ENST00000551845 CFAP97Q9P2B7 532 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 STRIP2Q9ULQ0 834 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 MYO6Q9UM54 1294 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 MRPS17Q9Y2R5 130 aaKnown RBP11.13□□□□□ -0.63
PTCH1-225ENST00000551845 MYO15AQ9UKN7 3530 aa11.13□□□□□ -0.63
PTCH1-225ENST00000551845 KRBA1A5PL33 1030 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 E5RJQ4 531 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 CAPN9O14815 690 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 MMEP08473 750 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 STARD6P59095 220 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 CDR2Q01850 454 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 EFEMP1Q12805 493 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 PDCLQ13371 301 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 ITPRIPL2Q3MIP1 535 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 FIGNQ5HY92 759 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 EFHC1Q5JVL4 640 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 ZNF852Q6ZMS4 543 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 ERICH1Q86X53 443 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 MIB1Q86YT6 1006 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 MSANTD4Q8NCY6 345 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 C1orf131Q8NDD1 294 aaKnown RBP11.12□□□□□ -0.63
PTCH1-225ENST00000551845 ZNF397Q8NF99 534 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-225ENST00000551845 EPS8L1Q8TE68 723 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 IPO4Q8TEX9 1081 aaKnown RBP11.12□□□□□ -0.63
PTCH1-225ENST00000551845 DDX1Q92499 740 aaKnown RBP11.12□□□□□ -0.63
PTCH1-225ENST00000551845 EDEM1Q92611 657 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 IQCDQ96DY2 449 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 TRIM62Q9BVG3 475 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 SEMA4AQ9H3S1 761 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 EBF3Q9H4W6 596 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 GTSE1Q9NYZ3 720 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 MARCH2Q9P0N8 246 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 CYTH4Q9UIA0 394 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 RASAL2Q9UJF2 1139 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 NOTCH4Q99466 2003 aa11.12□□□□□ -0.63
PTCH1-225ENST00000551845 RIF1Q5UIP0 2472 aaKnown RBP11.12□□□□□ -0.63
PTCH1-225ENST00000551845 C2orf16Q68DN1 1984 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 KANSL1LA0AUZ9 987 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 SLC12A8A0AV02 714 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 HAX1O00165 279 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 ARNTLO00327 626 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 MDM4O15151 490 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 NCAM2O15394 837 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 PAPSS1O43252 624 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-225ENST00000551845 NFATC1O95644 943 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 LSM8O95777 96 aaKnown RBP11.11□□□□□ -0.63
PTCH1-225ENST00000551845 LTFP02788 710 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 GLI1P08151 1106 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 NCAM1P13591 858 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 CDH5P33151 784 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-225ENST00000551845 YWHAZP63104 245 aaKnown RBP11.11□□□□□ -0.63
PTCH1-225ENST00000551845 TNK2Q07912 1038 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 USP4Q13107 963 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 SFMBT2Q5VUG0 894 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 TRIM68Q6AZZ1 485 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 OR6B2Q6IFH4 312 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 TRIM72Q6ZMU5 477 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 TPRG1Q6ZUI0 275 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 HTR3DQ70Z44 454 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 BEND5Q7L4P6 421 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 IRF2BP2Q7Z5L9 587 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 RALGPS2Q86X27 583 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-225ENST00000551845 ZDHHC17Q8IUH5 632 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 CPA6Q8N4T0 437 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 TTC8Q8TAM2 541 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 RIN3Q8TB24 985 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 CLEC4CQ8WTT0 213 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 CPLX3Q8WVH0 158 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 FAM3CQ92520 227 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 ATP2A3Q93084 1043 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 EXOC4Q96A65 974 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 FAM149B1Q96BN6 582 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 OTUB2Q96DC9 234 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 C18orf8Q96DM3 657 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 MSANTD3Q96H12 275 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 CPXM1Q96SM3 734 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 AGPAT1Q99943 283 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 DCLK3Q9C098 648 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 XPO4Q9C0E2 1151 aaKnown RBP11.11□□□□□ -0.63
PTCH1-225ENST00000551845 NUCKS1Q9H1E3 243 aaKnown RBP11.11□□□□□ -0.63
PTCH1-225ENST00000551845 ECT2Q9H8V3 914 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 AIPL1Q9NZN9 384 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 LSM7Q9UK45 103 aaKnown RBP11.11□□□□□ -0.63
PTCH1-225ENST00000551845 ZNF510Q9Y2H8 683 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 SIT1Q9Y3P8 196 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.11□□□□□ -0.63
PTCH1-225ENST00000551845 WNT6Q9Y6F9 365 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 PIAS3Q9Y6X2 628 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 R4GN57 208 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 DOCK6Q96HP0 2047 aa11.11□□□□□ -0.63
PTCH1-225ENST00000551845 LRRC53A6NM62 1247 aa11.1□□□□□ -0.63
PTCH1-225ENST00000551845 FAM170BA6NMN3 283 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms