RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 FRMD1Q8N878 549 aa24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 JAKMIP2Q96AA8 810 aa24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 ELMO3Q96BJ8 720 aa24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 TMEM74BQ9NUR3 256 aa24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 CALCOCO1Q9P1Z2 691 aa24.32■■□□□ 1.48
SMARCD1-209ENST00000550477 GFRA2O00451 464 aa24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 NDUFS2O75306 463 aa24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 RARGP13631 454 aa24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 ITPKAP23677 461 aa24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 WASP42768 502 aa24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 INCA1Q0VD86 236 aa24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 C10orf120Q5SQS8 335 aa24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 PEAR1Q5VY43 1037 aaPredicted RBP24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 SPOPLQ6IQ16 392 aa24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 UNQ6494/PRO21346Q6UXR6 183 aa24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 CLEC20AQ6ZU45 233 aa24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 DEFB124Q8NES8 71 aa24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 IPO4Q8TEX9 1081 aaKnown RBP24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 NAGPAQ9UK23 515 aa24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 ASCC3Q8N3C0 2202 aaKnown RBP24.31■■□□□ 1.48
SMARCD1-209ENST00000550477 OPHN1O60890 802 aa24.3■■□□□ 1.48
SMARCD1-209ENST00000550477 SYPP08247 313 aa24.3■■□□□ 1.48
SMARCD1-209ENST00000550477 SERPINF2P08697 491 aa24.3■■□□□ 1.48
SMARCD1-209ENST00000550477 CHKAP35790 457 aa24.3■■□□□ 1.48
SMARCD1-209ENST00000550477 COG7P83436 770 aa24.3■■□□□ 1.48
SMARCD1-209ENST00000550477 SYCP2LQ5T4T6 812 aa24.3■■□□□ 1.48
SMARCD1-209ENST00000550477 EGFLAMQ63HQ2 1017 aa24.3■■□□□ 1.48
SMARCD1-209ENST00000550477 TTC39CQ8N584 583 aa24.3■■□□□ 1.48
SMARCD1-209ENST00000550477 GTPBP2Q9BX10 602 aaKnown RBP24.3■■□□□ 1.48
SMARCD1-209ENST00000550477 HMGXB4Q9UGU5 601 aa24.3■■□□□ 1.48
SMARCD1-209ENST00000550477 CEP192Q8TEP8 1941 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 A0A1B0GVL5 298 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 CYP26A1O43174 497 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 PFKFB1P16118 471 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 NR2F2P24468 414 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 SLC8A3P57103 927 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 ENPEPQ07075 957 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 STARD3Q14849 445 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 NFIL3Q16649 462 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 ZNF276Q8N554 614 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 UCMAQ8WVF2 138 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 FOXJ1Q92949 421 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 WBP2Q969T9 261 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 CCDC34Q96HJ3 373 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 ADAM33Q9BZ11 813 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 DCLK3Q9C098 648 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 NIF3L1Q9GZT8 377 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 FAM124BQ9H5Z6 455 aaPredicted RBP24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 SUSD2Q9UGT4 822 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 PCNX2A6NKB5 2137 aa24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 ATXN2Q99700 1313 aaKnown RBP24.29■■□□□ 1.48
SMARCD1-209ENST00000550477 A0A1W2PQH9 124 aa24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 TMEM8BA6NDV4 472 aa24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 UPK3BL1B0FP48 263 aa24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 UPK3BL2E5RIL1 263 aa24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 NPC1O15118 1278 aa24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 GNSP15586 552 aa24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 PSMC2P35998 433 aaKnown RBP24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 SYKP43405 635 aa24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 HNRNPDQ14103 355 aaKnown RBP24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 FAM186BQ8IYM0 893 aa24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 RGL4Q8IZJ4 473 aa24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 ARHGAP18Q8N392 663 aa24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 DEFB119Q8N690 84 aa24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 SPATA32Q96LK8 384 aa24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 GABRG3Q99928 467 aa24.28■■□□□ 1.48
SMARCD1-209ENST00000550477 IGHV1OR15-9A0A0B4J2B8 117 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 A0A1W2PQD8 194 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 A0A1W2PQF6 199 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 TRIM24O15164 1050 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 GREM1O60565 184 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 CD58P19256 250 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 GCLMP48507 274 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 PGFP49763 221 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 KIF11P52732 1056 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 ZNF132P52740 706 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 KRT85P78386 507 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 ADAM9Q13443 819 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 GPRIN1Q7Z2K8 1008 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 CCDC186Q7Z3E2 898 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 FAXDC2Q96IV6 333 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 HEXIM2Q96MH2 286 aaKnown RBP24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 SCNM1Q9BWG6 230 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 DUSP16Q9BY84 665 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 OSER1Q9NX31 292 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 CLIC5Q9NZA1 410 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 STRIP2Q9ULQ0 834 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 CYP8B1Q9UNU6 501 aa24.27■■□□□ 1.48
SMARCD1-209ENST00000550477 C1QTNF9BB2RNN3 333 aa24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 HHLA1C9JL84 531 aa24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 CILPO75339 1184 aa24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 RHOBTB3O94955 611 aa24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 CYBBP04839 570 aa24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 C1QTNF9P0C862 333 aa24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 NDUFV2P19404 249 aa24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 GTF2H1P32780 548 aa24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 WDR45BQ5MNZ6 344 aa24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 MIB1Q86YT6 1006 aa24.26■■□□□ 1.47
SMARCD1-209ENST00000550477 TRIML1Q8N9V2 468 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms