RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 PDGFBP01127 241 aaPredicted RBP20.25■□□□□ 0.83
DDX54-207ENST00000550016 ERBB2P04626 1255 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 CYP1A1P04798 512 aaPredicted RBP20.25■□□□□ 0.83
DDX54-207ENST00000550016 IRF1P10914 325 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 ARSAP15289 507 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 GABRB2P47870 512 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 KPNA1P52294 538 aaPredicted RBP20.25■□□□□ 0.83
DDX54-207ENST00000550016 ASIC2Q16515 512 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 EML3Q32P44 896 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 EFHC1Q5JVL4 640 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 NAA35Q5VZE5 725 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 OR6B2Q6IFH4 312 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 MSANTD2Q6P1R3 559 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 HTR3DQ70Z44 454 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 BEND5Q7L4P6 421 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 MSANTD4Q8NCY6 345 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 ZNF397Q8NF99 534 aaPredicted RBP20.25■□□□□ 0.83
DDX54-207ENST00000550016 CPA5Q8WXQ8 436 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 WBP2Q969T9 261 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 FAM149B1Q96BN6 582 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 C18orf8Q96DM3 657 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 AGPAT1Q99943 283 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 NUCKS1Q9H1E3 243 aaKnown RBP20.25■□□□□ 0.83
DDX54-207ENST00000550016 RBSNQ9H1K0 784 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 C8orf33Q9H7E9 229 aaPredicted RBP20.25■□□□□ 0.83
DDX54-207ENST00000550016 CAPN11Q9UMQ6 739 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.25■□□□□ 0.831e-7■■■■□ 21.5
DDX54-207ENST00000550016 ITIH6Q6UXX5 1313 aa20.25■□□□□ 0.83
DDX54-207ENST00000550016 COL4A3Q01955 1670 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 SLC12A8A0AV02 714 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 STK25O00506 426 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 STC2O76061 302 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 FYNP06241 537 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 GLI1P08151 1106 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 YWHAZP63104 245 aaKnown RBP20.24■□□□□ 0.83
DDX54-207ENST00000550016 TPRG1Q6ZUI0 275 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 FAM183BPQ6ZVS7 135 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 ZDHHC17Q8IUH5 632 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 CPA6Q8N4T0 437 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 FBXL6Q8N531 539 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 TTC8Q8TAM2 541 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 OTUB2Q96DC9 234 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 TBC1D17Q9HA65 648 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 POPDC2Q9HBU9 364 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 ASNSD1Q9NWL6 643 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 LSM7Q9UK45 103 aaKnown RBP20.24■□□□□ 0.83
DDX54-207ENST00000550016 PIAS3Q9Y6X2 628 aa20.24■□□□□ 0.83
DDX54-207ENST00000550016 MAN2B1O00754 1011 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 SCAMP3O14828 347 aaKnown RBP20.23■□□□□ 0.83
DDX54-207ENST00000550016 GREM1O60565 184 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 NFATC1O95644 943 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 NCAM1P13591 858 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 ZBED6P86452 979 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 SLC6A3Q01959 620 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 NR1H3Q13133 447 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 SARM1Q6SZW1 724 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 OLFML1Q6UWY5 402 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 ZNF852Q6ZMS4 543 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 TOGARAM2Q6ZUX3 1019 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 GAS2L3Q86XJ1 694 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 ADGRG2Q8IZP9 1017 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 FLCNQ8NFG4 579 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 CPLX3Q8WVH0 158 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 MSANTD3Q96H12 275 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 PCDHB18PQ96TA0 734 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 LRFN3Q9BTN0 628 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 DDX23Q9BUQ8 820 aaKnown RBP20.23■□□□□ 0.83
DDX54-207ENST00000550016 DCLK3Q9C098 648 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 ECT2Q9H8V3 914 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 SFMBT1Q9UHJ3 866 aa20.23■□□□□ 0.83
DDX54-207ENST00000550016 HBS1LQ9Y450 684 aaKnown RBP20.23■□□□□ 0.83
DDX54-207ENST00000550016 ZDBF2Q9HCK1 2354 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 OTOL1A6NHN0 477 aaPredicted RBP20.22■□□□□ 0.83
DDX54-207ENST00000550016 CAPN9O14815 690 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 HMBSP08397 361 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 TNFAIP3P21580 790 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 PRKCIP41743 596 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 TAF5Q15542 800 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 CLEC16AQ2KHT3 1053 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 SPECC1LQ69YQ0 1117 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 C1orf228Q6PIY5 440 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 RALGPS2Q86X27 583 aaPredicted RBP20.22■□□□□ 0.83
DDX54-207ENST00000550016 BBS7Q8IWZ6 715 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 SYN2Q92777 582 aaPredicted RBP20.22■□□□□ 0.83
DDX54-207ENST00000550016 PLD4Q96BZ4 506 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 PIWIL1Q96J94 861 aaKnown RBP20.22■□□□□ 0.83
DDX54-207ENST00000550016 SEPT11Q9NVA2 429 aaKnown RBP20.22■□□□□ 0.83
DDX54-207ENST00000550016 NAALADL1Q9UQQ1 740 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 ZNF510Q9Y2H8 683 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 LUC7L2Q9Y383 392 aaKnown RBP20.22■□□□□ 0.83
DDX54-207ENST00000550016 KMT2EQ8IZD2 1858 aa20.22■□□□□ 0.83
DDX54-207ENST00000550016 KANSL1LA0AUZ9 987 aa20.21■□□□□ 0.83
DDX54-207ENST00000550016 SHISA7A6NL88 538 aa20.21■□□□□ 0.83
DDX54-207ENST00000550016 SPECC1L-ADORA2AF8WAN1 911 aa20.21■□□□□ 0.83
DDX54-207ENST00000550016 HSF2BPO75031 334 aa20.21■□□□□ 0.83
DDX54-207ENST00000550016 GYPCP04921 128 aa20.21■□□□□ 0.83
DDX54-207ENST00000550016 UNGP13051 313 aaPredicted RBP20.21■□□□□ 0.83
DDX54-207ENST00000550016 CD72P21854 359 aa20.21■□□□□ 0.83
DDX54-207ENST00000550016 MMP8P22894 467 aa20.21■□□□□ 0.83
DDX54-207ENST00000550016 CTHP32929 405 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms