RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 SCUBE3Q8IX30 993 aa16.44■□□□□ 0.22
SCRIB-208ENST00000546337 SYNPOQ8N3V7 929 aa16.44■□□□□ 0.22
SCRIB-208ENST00000546337 ZNF397Q8NF99 534 aaPredicted RBP16.44■□□□□ 0.22
SCRIB-208ENST00000546337 CCDC26Q8TAB7 109 aa16.44■□□□□ 0.22
SCRIB-208ENST00000546337 RIN3Q8TB24 985 aa16.44■□□□□ 0.22
SCRIB-208ENST00000546337 IPO4Q8TEX9 1081 aaKnown RBP16.44■□□□□ 0.22
SCRIB-208ENST00000546337 FAM3CQ92520 227 aa16.44■□□□□ 0.22
SCRIB-208ENST00000546337 CLDN23Q96B33 292 aa16.44■□□□□ 0.22
SCRIB-208ENST00000546337 PLD4Q96BZ4 506 aa16.44■□□□□ 0.22
SCRIB-208ENST00000546337 LTB4R2Q9NPC1 389 aa16.44■□□□□ 0.22
SCRIB-208ENST00000546337 SMPD4Q9NXE4 827 aa16.44■□□□□ 0.22
SCRIB-208ENST00000546337 RRN3Q9NYV6 651 aa16.44■□□□□ 0.22
SCRIB-208ENST00000546337 AIPL1Q9NZN9 384 aa16.44■□□□□ 0.22
SCRIB-208ENST00000546337 MARCH2Q9P0N8 246 aa16.44■□□□□ 0.22
SCRIB-208ENST00000546337 CYTH4Q9UIA0 394 aa16.44■□□□□ 0.22
SCRIB-208ENST00000546337 NOCTQ9UK39 431 aaKnown RBP16.44■□□□□ 0.22
SCRIB-208ENST00000546337 A0A1W2PQJ5 194 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 FAM86C2PA6NEL3 165 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 E5RJQ4 531 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 SPECC1L-ADORA2AF8WAN1 911 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 TRDMT1O14717 391 aaKnown RBP16.43■□□□□ 0.22
SCRIB-208ENST00000546337 PAPSS1O43252 624 aaPredicted RBP16.43■□□□□ 0.22
SCRIB-208ENST00000546337 GREM1O60565 184 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 GFPT2O94808 682 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 CYP1A1P04798 512 aaPredicted RBP16.43■□□□□ 0.22
SCRIB-208ENST00000546337 PNMA6AP0CW24 399 aaPredicted RBP16.43■□□□□ 0.22
SCRIB-208ENST00000546337 PBX1P40424 430 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 EIF2DP41214 584 aaKnown RBP16.43■□□□□ 0.22
SCRIB-208ENST00000546337 RPS9P46781 194 aaKnown RBP16.43■□□□□ 0.22
SCRIB-208ENST00000546337 RING1Q06587 406 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 MTA1Q13330 715 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 TRIP4Q15650 581 aaPredicted RBP16.43■□□□□ 0.22
SCRIB-208ENST00000546337 PREPLQ4J6C6 727 aaPredicted RBP16.43■□□□□ 0.22
SCRIB-208ENST00000546337 DGKKQ5KSL6 1271 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 TOGARAM2Q6ZUX3 1019 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 ARCQ7LC44 396 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 NOP9Q86U38 636 aaKnown RBP16.43■□□□□ 0.22
SCRIB-208ENST00000546337 FLCNQ8NFG4 579 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 PJA1Q8NG27 643 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 BAP1Q92560 729 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 SYN2Q92777 582 aaPredicted RBP16.43■□□□□ 0.22
SCRIB-208ENST00000546337 AZIN2Q96A70 460 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 ZFYVE19Q96K21 471 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 LINC00597Q9H2U6 94 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 POPDC2Q9HBU9 364 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 GTSE1Q9NYZ3 720 aa16.43■□□□□ 0.22
SCRIB-208ENST00000546337 FAM170BA6NMN3 283 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 STC2O76061 302 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 ADH1CP00326 375 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 CTHP32929 405 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 CHKAP35790 457 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 EFEMP1Q12805 493 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 CWF19L1Q69YN2 538 aaKnown RBP16.42■□□□□ 0.22
SCRIB-208ENST00000546337 Q6ZNB5 142 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 SLC26A9Q7LBE3 791 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 IRF2BP2Q7Z5L9 587 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 ERICH1Q86X53 443 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 UNC45BQ8IWX7 931 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 C18orf8Q96DM3 657 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 SERPINB11Q96P15 392 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 CPXM1Q96SM3 734 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 TTYH3Q9C0H2 523 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 IRF2BPLQ9H1B7 796 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 EBF3Q9H4W6 596 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 SYNCQ9H7C4 482 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 WNT6Q9Y6F9 365 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 TRIOO75962 3097 aa16.42■□□□□ 0.22
SCRIB-208ENST00000546337 SHISA7A6NL88 538 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 HSF2BPO75031 334 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 PDGFBP01127 241 aaPredicted RBP16.41■□□□□ 0.22
SCRIB-208ENST00000546337 DRD1P21728 446 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 GJA4P35212 333 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 PRKCIP41743 596 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 HARS2P49590 506 aaKnown RBP16.41■□□□□ 0.22
SCRIB-208ENST00000546337 NOMO3P69849 1222 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 SLC6A3Q01959 620 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 GAD2Q05329 585 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 TNK2Q07912 1038 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 LRRC32Q14392 662 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 DHCR24Q15392 516 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 FBXO43Q4G163 708 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 ZNF687Q8N1G0 1237 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 MARK1Q9P0L2 795 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 WDR35Q9P2L0 1181 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 RASAL2Q9UJF2 1139 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 STOML2Q9UJZ1 356 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.41■□□□□ 0.221e-6■■□□□ 13.1
SCRIB-208ENST00000546337 BZW2Q9Y6E2 419 aaKnown RBP16.41■□□□□ 0.22
SCRIB-208ENST00000546337 ITIH6Q6UXX5 1313 aa16.41■□□□□ 0.22
SCRIB-208ENST00000546337 SLC12A8A0AV02 714 aa16.4■□□□□ 0.22
SCRIB-208ENST00000546337 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.4■□□□□ 0.22
SCRIB-208ENST00000546337 CAPN9O14815 690 aa16.4■□□□□ 0.22
SCRIB-208ENST00000546337 HOXC11O43248 304 aaPredicted RBP16.4■□□□□ 0.22
SCRIB-208ENST00000546337 MMEP08473 750 aa16.4■□□□□ 0.22
SCRIB-208ENST00000546337 NCAM1P13591 858 aa16.4■□□□□ 0.22
SCRIB-208ENST00000546337 ARSAP15289 507 aa16.4■□□□□ 0.22
SCRIB-208ENST00000546337 CHRNB2P17787 502 aa16.4■□□□□ 0.22
SCRIB-208ENST00000546337 FMO1Q01740 532 aa16.4■□□□□ 0.22
SCRIB-208ENST00000546337 PTPN20Q4JDL3 420 aa16.4■□□□□ 0.22
SCRIB-208ENST00000546337 TMEM196Q5HYL7 178 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms