RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 AMHP03971 560 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 IL4RP24394 825 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 ECHS1P30084 290 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 SLC5A3P53794 718 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 KRT17Q04695 432 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 DPYSL3Q14195 570 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 PDK2Q15119 407 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 TRIP13Q15645 432 aaPredicted RBP11.48□□□□□ -0.57
SCG3-202ENST00000542355 DDR2Q16832 855 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 PPP6R3Q5H9R7 873 aaPredicted RBP11.48□□□□□ -0.57
SCG3-202ENST00000542355 SDHAF4Q5VUM1 108 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 PPP2R2DQ66LE6 453 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 EMBQ6PCB8 327 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 RSPO2Q6UXX9 243 aaPredicted RBP11.48□□□□□ -0.57
SCG3-202ENST00000542355 BHLHA9Q7RTU4 235 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 CCDC185Q8N715 623 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 SLC7A14Q8TBB6 771 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 ADAM32Q8TC27 787 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 EDEM1Q92611 657 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 NEUROG2Q9H2A3 272 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 FAM114A2Q9NRY5 505 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
SCG3-202ENST00000542355 PCDHB5Q9Y5E4 795 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 USP3Q9Y6I4 520 aa11.48□□□□□ -0.57
SCG3-202ENST00000542355 C7P10643 843 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 CPB1P15086 417 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 EN2P19622 333 aaPredicted RBP11.47□□□□□ -0.57
SCG3-202ENST00000542355 RDXP35241 583 aaKnown RBP11.47□□□□□ -0.57
SCG3-202ENST00000542355 DEUP1Q05D60 604 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 BYSLQ13895 437 aaKnown RBP11.47□□□□□ -0.57
SCG3-202ENST00000542355 OTUD1Q5VV17 481 aaPredicted RBP11.47□□□□□ -0.57
SCG3-202ENST00000542355 BSPRYQ5W0U4 402 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 BBS12Q6ZW61 710 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 OTOP2Q7RTS6 562 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 GSTA5Q7RTV2 222 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 EIF1ADQ8N9N8 165 aaKnown RBP11.47□□□□□ -0.57
SCG3-202ENST00000542355 GRK7Q8WTQ7 553 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 SLCO2A1Q92959 643 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 FUBP3Q96I24 572 aaKnown RBP eCLIP11.47□□□□□ -0.57
SCG3-202ENST00000542355 DHX35Q9H5Z1 703 aaKnown RBP11.47□□□□□ -0.57
SCG3-202ENST00000542355 PCDH18Q9HCL0 1135 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 ZNF148Q9UQR1 794 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 SLC27A5Q9Y2P5 690 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 TNFRSF10BO14763 440 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 GAS8O95995 478 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 GPR15P49685 360 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 DRG2P55039 364 aaKnown RBP11.47□□□□□ -0.57
SCG3-202ENST00000542355 WDR5P61964 334 aaKnown RBP11.47□□□□□ -0.57
SCG3-202ENST00000542355 OTUD4Q01804 1114 aaKnown RBP11.47□□□□□ -0.57
SCG3-202ENST00000542355 PRSS55Q6UWB4 352 aaPredicted RBP11.47□□□□□ -0.57
SCG3-202ENST00000542355 ANKS3Q6ZW76 656 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 STKLD1Q8NE28 680 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 ACTL9Q8TC94 416 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.47□□□□□ -0.57
SCG3-202ENST00000542355 IRGQQ8WZA9 623 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 ZNF689Q96CS4 500 aaPredicted RBP11.47□□□□□ -0.57
SCG3-202ENST00000542355 IGSF21Q96ID5 467 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 RNF157Q96PX1 679 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 PIGVQ9NUD9 493 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 AP4E1Q9UPM8 1137 aa11.47□□□□□ -0.57
SCG3-202ENST00000542355 H7C4K7 107 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 TBC1D4O60343 1298 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 L1CAMP32004 1257 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 RPL21P46778 160 aaKnown RBP11.46□□□□□ -0.57
SCG3-202ENST00000542355 PLTPP55058 493 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 GPR17Q13304 367 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 BTG3Q14201 252 aaPredicted RBP11.46□□□□□ -0.57
SCG3-202ENST00000542355 ANKRD20A8PQ5CZ79 823 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 KCNT2Q6UVM3 1135 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 VSTM1Q6UX27 236 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 BNIPLQ7Z465 357 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 PRUNE1Q86TP1 453 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 PYROXD2Q8N2H3 581 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 TTC9BQ8N6N2 239 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 TTC13Q8NBP0 860 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.46□□□□□ -0.57
SCG3-202ENST00000542355 CAVIN3Q969G5 261 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 UCN2Q96RP3 112 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 TANC1Q9C0D5 1861 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 TMPRSS4Q9NRS4 437 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 KLHL42Q9P2K6 505 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 ASIC3Q9UHC3 531 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 CDY1Q9Y6F8 540 aa11.46□□□□□ -0.57
SCG3-202ENST00000542355 TSC2P49815 1807 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 C2CD2LO14523 706 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 SOAT2O75908 522 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 VPS41P49754 854 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 TFDP2Q14188 446 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 DPYSL2Q16555 572 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 USP41Q3LFD5 358 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 MGAT5BQ3V5L5 792 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 KIAA1841Q6NSI8 718 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 DRICH1Q6PGQ1 229 aaPredicted RBP11.45□□□□□ -0.58
SCG3-202ENST00000542355 NPNTQ6UXI9 565 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 RNF19BQ6ZMZ0 732 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 SYDE1Q6ZW31 735 aaPredicted RBP11.45□□□□□ -0.58
SCG3-202ENST00000542355 ZNF365Q70YC5 407 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 SCML4Q8N228 414 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 GPR152Q8TDT2 470 aa11.45□□□□□ -0.58
SCG3-202ENST00000542355 RIN2Q8WYP3 895 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms