RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 CNTFP26441 200 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 PIK3R1P27986 724 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 CDC42EP5Q6NZY7 148 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 BARGINQ6ZT62 677 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 ZNF512BQ96KM6 892 aaPredicted RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 ACOX2Q99424 681 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 PPIEQ9UNP9 301 aaKnown RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 MAGEA13PA6NCF6 341 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 USP27XA6NNY8 438 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 CCNT2O60583 730 aaKnown RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 WEE1P30291 646 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 IFNGR2P38484 337 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 GMPSP49915 693 aaPredicted RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 BCAT1P54687 386 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 FAXCQ5TGI0 409 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 CDC73Q6P1J9 531 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 KRT74Q7RTS7 529 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 FAM228AQ86W67 206 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 KIF2BQ8N4N8 673 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 ENGASEQ8NFI3 743 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 ACSF2Q96CM8 615 aaPredicted RBP11.05□□□□□ -0.64
GABRB3-204ENST00000541819 ERP44Q9BS26 406 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 SPATA31A3Q5VYP0 1347 aa11.05□□□□□ -0.64
GABRB3-204ENST00000541819 CPSF1Q10570 1443 aaKnown RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 KRT6AP02538 564 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 KRT6BP04259 564 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 CYP2A6P11509 494 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 VAV1P15498 845 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 KRT6CP48668 564 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 RAD23AP54725 363 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 IRX1P78414 480 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 CYP20A1Q6UW02 462 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 OR2W6PQ8NHA6 318 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 ZSCAN18Q8TBC5 510 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 TRPC4APQ8TEL6 797 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 ROGDIQ9GZN7 287 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 CYP4F12Q9HCS2 524 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 ANAPC2Q9UJX6 822 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 ZMYND8Q9ULU4 1186 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 A0A1B0GTH6 734 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 IGF2BP3O00425 579 aaKnown RBP eCLIP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 HS6ST1O60243 411 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 ABCB1P08183 1280 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 IL2P60568 153 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 TSNQ15631 228 aaKnown RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 TAF2Q6P1X5 1199 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 DSG4Q86SJ6 1040 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 TRIM63Q969Q1 353 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 TMEM159Q96B96 161 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 BBS4Q96RK4 519 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 C1QTNF7Q9BXJ2 289 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 ALDH8A1Q9H2A2 487 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 RBM12Q9NTZ6 932 aaKnown RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 MYMKA6NI61 221 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 MEI4A8MW99 385 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 IGKV5-2P06315 115 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 SLC2A4P14672 509 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 MAPKAPK2P49137 400 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 ELAVL2Q12926 359 aaKnown RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 SBK1Q52WX2 424 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 PDZK1Q5T2W1 519 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 AGMOQ6ZNB7 445 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 ZNF655Q8N720 491 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 TARS2Q9BW92 718 aaKnown RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 ISCUQ9H1K1 167 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 GPAMQ9HCL2 828 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 SAE1Q9UBE0 346 aaPredicted RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 SIK3Q9Y2K2 1263 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 CRYL1Q9Y2S2 319 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 N6AMT1Q9Y5N5 214 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 A0A087WZ62 844 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 WWP2O00308 870 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 ZNF862O60290 1169 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 IL5RAQ01344 420 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 MTM1Q13496 603 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 MTF1Q14872 753 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 CRYMQ14894 314 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 C16orf86Q6ZW13 317 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 IKBIPQ70UQ0 350 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 UTP15Q8TED0 518 aaKnown RBP11.04□□□□□ -0.64
GABRB3-204ENST00000541819 NT5MQ9NPB1 228 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 VAV3Q9UKW4 847 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 ALG6Q9Y672 507 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 ADGBQ8N7X0 1667 aa11.04□□□□□ -0.64
GABRB3-204ENST00000541819 TPBGLP0DKB5 382 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 GLRBP48167 497 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 HNMTP50135 292 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 SERPINH1P50454 418 aaKnown RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 ILF2Q12905 390 aaKnown RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 PPIL2Q13356 520 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
GABRB3-204ENST00000541819 PMF1Q6P1K2 205 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 MPZL3Q6UWV2 235 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 SVOPQ8N4V2 548 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 LPCAT1Q8NF37 534 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 DPY30Q9C005 99 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 RAD21L1Q9H4I0 556 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 SH3BP4Q9P0V3 963 aa11.03□□□□□ -0.64
GABRB3-204ENST00000541819 PRKAG3Q9UGI9 489 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms