RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 MAP9Q49MG5 647 aa25.56■■□□□ 1.68
TTC3-225ENST00000540756 NPNTQ6UXI9 565 aa25.56■■□□□ 1.68
TTC3-225ENST00000540756 RIN2Q8WYP3 895 aaPredicted RBP25.56■■□□□ 1.68
TTC3-225ENST00000540756 FUBP3Q96I24 572 aaKnown RBP eCLIP25.56■■□□□ 1.68
TTC3-225ENST00000540756 RAB17Q9H0T7 212 aa25.56■■□□□ 1.68
TTC3-225ENST00000540756 STAP1Q9ULZ2 295 aa25.56■■□□□ 1.68
TTC3-225ENST00000540756 AP4E1Q9UPM8 1137 aa25.56■■□□□ 1.68
TTC3-225ENST00000540756 EFR3BQ9Y2G0 817 aa25.56■■□□□ 1.68
TTC3-225ENST00000540756 DEUP1Q05D60 604 aa25.56■■□□□ 1.68
TTC3-225ENST00000540756 CASP8Q14790 479 aa25.56■■□□□ 1.68
TTC3-225ENST00000540756 PPP1R7Q15435 360 aa25.56■■□□□ 1.68
TTC3-225ENST00000540756 ANKS3Q6ZW76 656 aa25.56■■□□□ 1.68
TTC3-225ENST00000540756 RNF168Q8IYW5 571 aaPredicted RBP25.56■■□□□ 1.68
TTC3-225ENST00000540756 ATL2Q8NHH9 583 aa25.56■■□□□ 1.68
TTC3-225ENST00000540756 ACTL9Q8TC94 416 aa25.56■■□□□ 1.68
TTC3-225ENST00000540756 KCTD15Q96SI1 283 aaPredicted RBP25.56■■□□□ 1.68
TTC3-225ENST00000540756 IL23AQ9NPF7 189 aa25.56■■□□□ 1.68
TTC3-225ENST00000540756 I6L893 689 aaPredicted RBP25.55■■□□□ 1.68
TTC3-225ENST00000540756 EPHB4P54760 987 aa25.55■■□□□ 1.68
TTC3-225ENST00000540756 OTUD4Q01804 1114 aaKnown RBP25.55■■□□□ 1.68
TTC3-225ENST00000540756 GPR17Q13304 367 aa25.55■■□□□ 1.68
TTC3-225ENST00000540756 BYSLQ13895 437 aaKnown RBP25.55■■□□□ 1.68
TTC3-225ENST00000540756 B4GALNT4Q76KP1 1039 aa25.55■■□□□ 1.68
TTC3-225ENST00000540756 GLIS1Q8NBF1 620 aa25.55■■□□□ 1.68
TTC3-225ENST00000540756 PCDH19Q8TAB3 1148 aa25.55■■□□□ 1.68
TTC3-225ENST00000540756 IRGQQ8WZA9 623 aa25.55■■□□□ 1.68
TTC3-225ENST00000540756 BADQ92934 168 aa25.55■■□□□ 1.68
TTC3-225ENST00000540756 SLCO2A1Q92959 643 aa25.55■■□□□ 1.68
TTC3-225ENST00000540756 RDXP35241 583 aaKnown RBP25.54■■□□□ 1.68
TTC3-225ENST00000540756 CUL1Q13616 776 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 USP41Q3LFD5 358 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 ANKRD20A8PQ5CZ79 823 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 FAM182AQ5T1J6 154 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 SCD5Q86SK9 330 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 PQLC3Q8N755 202 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 FBXO22Q8NEZ5 403 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 RNF157Q96PX1 679 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 NMUR1Q9HB89 426 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 WDR6Q9NNW5 1121 aaKnown RBP25.54■■□□□ 1.68
TTC3-225ENST00000540756 HOMER3Q9NSC5 361 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 GRHL1Q9NZI5 618 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 RASAL2Q9UJF2 1139 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 NUDT5Q9UKK9 219 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 FZD10Q9ULW2 581 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 NEU2Q9Y3R4 380 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 ZBBXA8MT70 800 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 MAP2K7O14733 419 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 DUSP4Q13115 394 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 PDK2Q15119 407 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 DPYSL2Q16555 572 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 VSTM1Q6UX27 236 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 ZNF365Q70YC5 407 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 RUNDC3BQ96NL0 473 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 NCAPGQ9BPX3 1015 aa25.54■■□□□ 1.68
TTC3-225ENST00000540756 H7C4K7 107 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 VPS41P49754 854 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 YWHAGP61981 247 aaKnown RBP eCLIP25.53■■□□□ 1.68
TTC3-225ENST00000540756 MGAT5BQ3V5L5 792 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 HDXQ7Z353 690 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 SCML4Q8N228 414 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 C8orf48Q96LL4 319 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 YME1L1Q96TA2 773 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 SEPT5Q99719 369 aaPredicted RBP25.53■■□□□ 1.68
TTC3-225ENST00000540756 TMEM121Q9BTD3 319 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 MAK16Q9BXY0 300 aaKnown RBP25.53■■□□□ 1.68
TTC3-225ENST00000540756 DDIT4Q9NX09 232 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 OSER1Q9NX31 292 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 CXXC1Q9P0U4 656 aaPredicted RBP25.53■■□□□ 1.68
TTC3-225ENST00000540756 COL4A4P53420 1690 aaPredicted RBP25.53■■□□□ 1.68
TTC3-225ENST00000540756 WDR27A2RRH5 827 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 MAP3K6O95382 1288 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 ETS1P14921 441 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 OASLQ15646 514 aaKnown RBP25.53■■□□□ 1.68
TTC3-225ENST00000540756 PSMD5Q16401 504 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 ZDHHC24Q6UX98 284 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 TAC4Q86UU9 113 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 MAP7D3Q8IWC1 876 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 NUP93Q8N1F7 819 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 SLC39A11Q8N1S5 342 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 SLC35B2Q8TB61 432 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 FAM71BQ8TC56 605 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 ZNF558Q96NG5 402 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 ZDHHC18Q9NUE0 388 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 ZNF148Q9UQR1 794 aa25.53■■□□□ 1.68
TTC3-225ENST00000540756 RANBP2P49792 3224 aaKnown RBP25.52■■□□□ 1.68
TTC3-225ENST00000540756 KIAA1671Q9BY89 1806 aa25.52■■□□□ 1.68
TTC3-225ENST00000540756 ZSCAN5DPP0CG00 497 aa25.52■■□□□ 1.68
TTC3-225ENST00000540756 OR1D2P34982 312 aa25.52■■□□□ 1.68
TTC3-225ENST00000540756 MAGEA11P43364 429 aa25.52■■□□□ 1.68
TTC3-225ENST00000540756 MTMR3Q13615 1198 aa25.52■■□□□ 1.68
TTC3-225ENST00000540756 C1orf228Q6PIY5 440 aa25.52■■□□□ 1.68
TTC3-225ENST00000540756 TSEN2Q8NCE0 465 aaKnown RBP25.52■■□□□ 1.68
TTC3-225ENST00000540756 FAM204AQ9H8W3 233 aa25.52■■□□□ 1.68
TTC3-225ENST00000540756 FAM114A2Q9NRY5 505 aa25.52■■□□□ 1.68
TTC3-225ENST00000540756 CWC15Q9P013 229 aaKnown RBP25.52■■□□□ 1.68
TTC3-225ENST00000540756 MTRRQ9UBK8 725 aa25.52■■□□□ 1.68
TTC3-225ENST00000540756 GREB1Q4ZG55 1949 aa25.52■■□□□ 1.68
TTC3-225ENST00000540756 A0A1W2PQH9 124 aa25.51■■□□□ 1.67
TTC3-225ENST00000540756 TRIM66O15016 1216 aa25.51■■□□□ 1.67
TTC3-225ENST00000540756 PLTPP55058 493 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms