RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 NOMO1Q15155 1222 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 RWDD4Q6NW29 188 aaKnown RBP17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 NAT8LQ8N9F0 302 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 FNIP1Q8TF40 1166 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 SNX27Q96L92 541 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 FOXP3Q9BZS1 431 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 KRT82Q9NSB4 513 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 KLHL8Q9P2G9 620 aaPredicted RBP17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 C17orf102A2RUQ5 167 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 PFKMP08237 780 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 KYAT1Q16773 422 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 ARMC2Q8NEN0 867 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 PGBD4Q96DM1 585 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 TNIP3Q96KP6 325 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 RHOBTB2Q9BYZ6 727 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 NRDE2Q9H7Z3 1164 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 IPPQ9Y573 584 aa17.72■□□□□ 0.43
EPB41L3-204ENST00000540638 CFAP69A5D8W1 941 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 H0Y3Z8 333 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 TROVE2P10155 538 aaKnown RBP eCLIP17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 DEUP1Q05D60 604 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 OLIG2Q13516 323 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 OLFML1Q6UWY5 402 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 RFX8Q6ZV50 586 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 KCNK16Q96T55 309 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 MECRQ9BV79 373 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 DDX43Q9NXZ2 648 aaKnown RBP17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 FLRT1Q9NZU1 646 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 WDR81Q562E7 1941 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 C5orf60A6NFR6 353 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 BGNP21810 368 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 TKTL1P51854 596 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 PDE1BQ01064 536 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 NR1H3Q13133 447 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 PIGWQ7Z7B1 504 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 PLCD3Q8N3E9 789 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 DNAI2Q9GZS0 605 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 KIAA1257Q9ULG3 409 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 NME7Q9Y5B8 376 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 A8MUI8 341 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 ATP9BO43861 1147 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 B3GAT3O94766 335 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 METTL18O95568 372 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 CD4P01730 458 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 PCK1P35558 622 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 TMPRSS15P98073 1019 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 SPRYD7Q5W111 196 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 FERMT1Q9BQL6 677 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 L3MBTL1Q9Y468 752 aa17.71■□□□□ 0.43
EPB41L3-204ENST00000540638 AP1G2O75843 785 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 BEST1O76090 585 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 CBX6O95503 412 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 MOCS2O96007 188 aaPredicted RBP17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 USP17L7P0C7H9 530 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 TKTP29401 623 aaKnown RBP17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 RCN2Q14257 317 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 STILQ15468 1287 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 FAM187BQ17R55 369 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 TRMT10BQ6PF06 316 aaKnown RBP17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 MPP5Q8N3R9 675 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 B3GALNT2Q8NCR0 500 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 RILPQ96NA2 401 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 SMG5Q9UPR3 1016 aaKnown RBP17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 SNX10Q9Y5X0 201 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 TOP3BO95985 862 aaKnown RBP17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 GCAP28676 217 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 HIC1Q14526 733 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 ITIH4Q14624 930 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 ANKRD20A3Q5VUR7 823 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 ICE2Q659A1 982 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 DRICH1Q6PGQ1 229 aaPredicted RBP17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 YTHDF3Q7Z739 585 aaKnown RBP17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 TP53INP2Q8IXH6 220 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 ARRDC4Q8NCT1 418 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 KCNV2Q8TDN2 545 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 KDM4CQ9H3R0 1056 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 DDIT4Q9NX09 232 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 GJD2Q9UKL4 321 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 SCN1AP35498 2009 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 SCNN1GP51170 649 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 FSCN1Q16658 493 aaKnown RBP17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 FAM110CQ1W6H9 321 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 ZCCHC23Q6ZST2 131 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 HFE2Q6ZVN8 426 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 CCDC91Q7Z6B0 441 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 HACE1Q8IYU2 909 aa17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 ZNF75CPQ92670 426 aaPredicted RBP17.7■□□□□ 0.42
EPB41L3-204ENST00000540638 DOCK3Q8IZD9 2030 aa17.69■□□□□ 0.42
EPB41L3-204ENST00000540638 KRT37O76014 449 aa17.69■□□□□ 0.42
EPB41L3-204ENST00000540638 STK10O94804 968 aaKnown RBP17.69■□□□□ 0.42
EPB41L3-204ENST00000540638 GHRP10912 638 aa17.69■□□□□ 0.42
EPB41L3-204ENST00000540638 CPA2P48052 419 aa17.69■□□□□ 0.42
EPB41L3-204ENST00000540638 PDK2Q15119 407 aa17.69■□□□□ 0.42
EPB41L3-204ENST00000540638 SYPL2Q5VXT5 272 aa17.69■□□□□ 0.42
EPB41L3-204ENST00000540638 CDKL3Q8IVW4 592 aaPredicted RBP17.69■□□□□ 0.42
EPB41L3-204ENST00000540638 RIBC1Q8N443 379 aaPredicted RBP17.69■□□□□ 0.42
EPB41L3-204ENST00000540638 PQLC3Q8N755 202 aa17.69■□□□□ 0.42
EPB41L3-204ENST00000540638 ANKRD52Q8NB46 1076 aa17.69■□□□□ 0.42
EPB41L3-204ENST00000540638 AGR3Q8TD06 166 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms