RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TMX2-CTNND1H3BSU7 103 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 hCG_1984214I3L0E3 225 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 KMOO15229 486 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 CCNT2O60583 730 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 PLS3P13797 630 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 MAGEA4P43358 317 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 EPHB1P54762 984 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 COG2Q14746 738 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 XKR5Q6UX68 686 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 GRAMD2AQ8IUY3 354 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 RHOT2Q8IXI1 618 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 TTC13Q8NBP0 860 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 TBC1D15Q8TC07 691 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 HPS1Q92902 700 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 TAMM41Q96BW9 452 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 THAP11Q96EK4 314 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 EGLN2Q96KS0 407 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 CCDC138Q96M89 665 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 ZNF512Q96ME7 567 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 NUF2Q9BZD4 464 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 VPS11Q9H270 941 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 SOX13Q9UN79 622 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 PCDHGA3Q9Y5H0 932 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 ZNF536O15090 1300 aa9.81□□□□□ -0.84
CTNNA1-243ENST00000540387 A6NL46 340 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 USP17L15C9J2P7 530 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 USP17L13C9JLJ4 530 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 USP17L11C9JVI0 530 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 USP17L18D6R9N7 530 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 USP17L22D6RA61 530 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 USP17L17D6RBQ6 530 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 USP17L19D6RCP7 530 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 USP17L20D6RJB6 530 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 J3QRK9 145 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 PSMD12O00232 456 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 FARP2O94887 1054 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 OR52Z1P0C646 297 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 HOXD10P28358 340 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 ADCY8P40145 1251 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 TECP42680 631 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 HUNKP57058 714 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 TUBA1BP68363 451 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 SLC25A3Q00325 362 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 USP17L24Q0WX57 530 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 GRB10Q13322 594 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 PTK6Q13882 451 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 HERC4Q5GLZ8 1057 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 USP17L6PQ6QN14 398 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 TUBA1AQ71U36 451 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 GPR180Q86V85 440 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 RELL1Q8IUW5 271 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 CPSF7Q8N684 471 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 ESX1Q8N693 406 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 GOLM1Q8NBJ4 401 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 LILRB4Q8NHJ6 448 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 TCP10LQ8TDR4 215 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 ATP2A3Q93084 1043 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 FBXL8Q96CD0 374 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 CCDC124Q96CT7 223 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 CFAP57Q96MR6 1250 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 NUDT12Q9BQG2 462 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 DCLK3Q9C098 648 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 CDH19Q9H159 772 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 SLC38A10Q9HBR0 1119 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 RAVER2Q9HCJ3 691 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 TMEM260Q9NX78 707 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 MKS1Q9NXB0 559 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 TAS2R14Q9NYV8 317 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 SLC17A7Q9P2U7 560 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 IFT52Q9Y366 437 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 ESYT2A0FGR8 921 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 VWA5AO00534 786 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 CSDE1O75534 798 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 KRT75O95678 551 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 CCDC130P13994 396 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 COMTP21964 271 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 RRM1P23921 792 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 CSE1LP55060 971 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 PRKD1Q15139 912 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 UBE2SQ16763 222 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 SGO2Q562F6 1265 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 C11orf63Q6NUN7 778 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 CLVS1Q8IUQ0 354 aaPredicted RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 MMAAQ8IVH4 418 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 DAGLBQ8NCG7 672 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 PDZD8Q8NEN9 1154 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 CALML6Q8TD86 181 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 LARP4BQ92615 738 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 C12orf43Q96C57 262 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 ISOC1Q96CN7 298 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 OLFM1Q99784 485 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 FGFBP2Q9BYJ0 223 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 KLHL25Q9H0H3 589 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 SNX25Q9H3E2 840 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 XAB2Q9HCS7 855 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 SIX2Q9NPC8 291 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 SEL1LQ9UBV2 794 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 CDH7Q9ULB5 785 aa9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 GNEQ9Y223 722 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-243ENST00000540387 ERGIC3Q9Y282 383 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms