RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 P3H4Q92791 437 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 APBB2Q92870 758 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 NT5C3BQ969T7 300 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 ADAM7Q9H2U9 754 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 PABPC3Q9H361 631 aaKnown RBP23.36■■□□□ 1.33
HOMER3-204ENST00000539827 ADAM21Q9UKJ8 722 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 FZD10Q9ULW2 581 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 GOLGA6CA6NDK9 693 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 GOLGA6DP0CG33 693 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 RARGP13631 454 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 MNX1P50219 401 aaPredicted RBP23.36■■□□□ 1.33
HOMER3-204ENST00000539827 DEUP1Q05D60 604 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 TERF2Q15554 542 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 KCTD16Q68DU8 428 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 HIBCHQ6NVY1 386 aaPredicted RBP23.36■■□□□ 1.33
HOMER3-204ENST00000539827 BHLHA9Q7RTU4 235 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 UHMK1Q8TAS1 419 aaKnown RBP23.36■■□□□ 1.33
HOMER3-204ENST00000539827 SLC7A14Q8TBB6 771 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 ADAM32Q8TC27 787 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 ZNF670Q9BS34 389 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 PCDH9Q9HC56 1237 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 LRRC4CQ9HCJ2 640 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 GOLGA6AQ9NYA3 693 aa23.36■■□□□ 1.33
HOMER3-204ENST00000539827 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.35■■□□□ 1.33
HOMER3-204ENST00000539827 LTFP02788 710 aa23.35■■□□□ 1.33
HOMER3-204ENST00000539827 CYP2C18P33260 490 aa23.35■■□□□ 1.33
HOMER3-204ENST00000539827 RDXP35241 583 aaKnown RBP23.35■■□□□ 1.33
HOMER3-204ENST00000539827 FAAP100Q0VG06 881 aa23.35■■□□□ 1.33
HOMER3-204ENST00000539827 TRIM60Q495X7 471 aa23.35■■□□□ 1.33
HOMER3-204ENST00000539827 SLC39A12Q504Y0 691 aa23.35■■□□□ 1.33
HOMER3-204ENST00000539827 DARS2Q6PI48 645 aaKnown RBP23.35■■□□□ 1.33
HOMER3-204ENST00000539827 BNIPLQ7Z465 357 aa23.35■■□□□ 1.33
HOMER3-204ENST00000539827 DEFB128Q7Z7B8 93 aa23.35■■□□□ 1.33
HOMER3-204ENST00000539827 FAF2Q96CS3 445 aa23.35■■□□□ 1.33
HOMER3-204ENST00000539827 TMBIM4Q9HC24 238 aa23.35■■□□□ 1.33
HOMER3-204ENST00000539827 HEY1Q9Y5J3 304 aa23.35■■□□□ 1.33
HOMER3-204ENST00000539827 NLRC5Q86WI3 1866 aa23.35■■□□□ 1.33
HOMER3-204ENST00000539827 H7C0C1 242 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 SHBGP04278 402 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 ATP5OP48047 213 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 TLE2Q04725 743 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 DENND2CQ68D51 928 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 SLC9A4Q6AI14 798 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 SH2D3CQ8N5H7 860 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 EDEM1Q92611 657 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 CENPHQ9H3R5 247 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 TPX2Q9ULW0 747 aaKnown RBP23.34■■□□□ 1.33
HOMER3-204ENST00000539827 DCDC2CA8MYV0 355 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 TRAPPC3O43617 180 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 MAP3K6O95382 1288 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 NCAM1P13591 858 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 TGM2P21980 687 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 ROR1Q01973 937 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 IFFO1Q0D2I5 559 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 SLC29A2Q14542 456 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 C4orf50Q6ZRC1 276 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 ANKRD33Q7Z3H0 272 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 VSIG1Q86XK7 387 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 CEP57Q86XR8 500 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 FAM71DQ8N9W8 422 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 PIGVQ9NUD9 493 aa23.34■■□□□ 1.33
HOMER3-204ENST00000539827 RPL22P35268 128 aaKnown RBP23.33■■□□□ 1.33
HOMER3-204ENST00000539827 GRIK1P39086 918 aa23.33■■□□□ 1.33
HOMER3-204ENST00000539827 SLC11A1P49279 550 aa23.33■■□□□ 1.33
HOMER3-204ENST00000539827 IFRD2Q12894 506 aaPredicted RBP23.33■■□□□ 1.33
HOMER3-204ENST00000539827 FAM182AQ5T1J6 154 aa23.33■■□□□ 1.33
HOMER3-204ENST00000539827 TAB3Q8N5C8 712 aaPredicted RBP23.33■■□□□ 1.33
HOMER3-204ENST00000539827 ZCWPW1Q9H0M4 648 aa23.33■■□□□ 1.33
HOMER3-204ENST00000539827 CDC42EP4Q9H3Q1 356 aaKnown RBP23.33■■□□□ 1.33
HOMER3-204ENST00000539827 CWC15Q9P013 229 aaKnown RBP23.33■■□□□ 1.33
HOMER3-204ENST00000539827 PTPRDP23468 1912 aa23.33■■□□□ 1.33
HOMER3-204ENST00000539827 TBKBP1A7MCY6 615 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 RIPK2O43353 540 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 OAZ2O95190 189 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 AMPD1P23109 780 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 NRLP54845 237 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 VARS2Q5ST30 1063 aaKnown RBP23.32■■□□□ 1.32
HOMER3-204ENST00000539827 NPAS4Q8IUM7 802 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 SCAMP5Q8TAC9 235 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 DIS3LQ8TF46 1054 aaKnown RBP23.32■■□□□ 1.32
HOMER3-204ENST00000539827 LRRN4Q8WUT4 740 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 B3GALT6Q96L58 329 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 CSPG4P5Q96PW8 444 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 ABI2Q9NYB9 513 aaPredicted RBP23.32■■□□□ 1.32
HOMER3-204ENST00000539827 ADAM28Q9UKQ2 775 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 GOLGA6L10A6NI86 522 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 NT5C1B-RDH14C9J2C7 533 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 CXCL10P02778 98 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 ALDH2P05091 517 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 MYZAPP0CAP1 466 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 GOT1P17174 413 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 FAM171A1Q5VUB5 890 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 PM20D1Q6GTS8 502 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 SCN4BQ8IWT1 228 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 DCP1BQ8IZD4 617 aaKnown RBP23.32■■□□□ 1.32
HOMER3-204ENST00000539827 FAM76AQ8TAV0 307 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 COLEC11Q9BWP8 271 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 GPR62Q9BZJ7 368 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 MARCH5Q9NX47 278 aa23.32■■□□□ 1.32
HOMER3-204ENST00000539827 WBP1LQ9NX94 342 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms