RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 VPS41P49754 854 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 HDAC4P56524 1084 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 GSTO1P78417 241 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 PLOD1Q02809 727 aaPredicted RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 PPARDQ03181 441 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 FOLH1Q04609 750 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 SF3A3Q12874 501 aaKnown RBP eCLIP6.96□□□□□ -1.3
USP28-207ENST00000538475 KLF1Q13351 362 aaPredicted RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 SNAPC2Q13487 334 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 MESDQ14696 234 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 PKN2Q16513 984 aaKnown RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 DDB1Q16531 1140 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 MAPK6Q16659 721 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 ZNF423Q2M1K9 1284 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 CERKLQ49MI3 558 aaPredicted RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 PLEKHG4Q58EX7 1191 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 DCAF17Q5H9S7 520 aaPredicted RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 RARS2Q5T160 578 aaKnown RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 LGSNQ5TDP6 509 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 WDR78Q5VTH9 848 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 TCERG1LQ5VWI1 586 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 OLFML2BQ68BL8 750 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 LINC00299Q6ZSB3 139 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 ENOSF1Q7L5Y1 443 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 KRT28Q7Z3Y7 464 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 KCNK18Q7Z418 384 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 ZNF804AQ7Z570 1209 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 ARPINQ7Z6K5 226 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 ADAT2Q7Z6V5 191 aaKnown RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 ADGRA1Q86SQ6 560 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 SATL1Q86VE3 508 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 ZNF677Q86XU0 584 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 KATNAL2Q8IYT4 538 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 TMEM130Q8N3G9 435 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 MINDY2Q8NBR6 621 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 EXD1Q8NHP7 514 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 HM13Q8TCT9 377 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 ACTRT2Q8TDY3 377 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 SLC7A3Q8WY07 619 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 DLG3Q92796 817 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 BORCS5Q969J3 196 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 NSUN4Q96CB9 384 aaKnown RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 NMD3Q96D46 503 aaKnown RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 CMTM5Q96DZ9 223 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 APOPT1Q96IL0 206 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 VCPIP1Q96JH7 1222 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 SNX27Q96L92 541 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 FAM20AQ96MK3 541 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 KCNK16Q96T55 309 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 OLFM1Q99784 485 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 CCT7Q99832 543 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 DDX50Q9BQ39 737 aaKnown RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 TMEM47Q9BQJ4 181 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 ACSS3Q9H6R3 686 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 IL17RBQ9NRM6 502 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 CLIC5Q9NZA1 410 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 EPS15L1Q9UBC2 864 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 RSL24D1Q9UHA3 163 aaKnown RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 TBK1Q9UHD2 729 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 SLC7A8Q9UHI5 535 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 VPS28Q9UK41 221 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 PTBP2Q9UKA9 531 aaKnown RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 CROTQ9UKG9 612 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 CDH7Q9ULB5 785 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 PSMD13Q9UNM6 376 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 LZTS1Q9Y250 596 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 B3GNT3Q9Y2A9 372 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 PTPN22Q9Y2R2 807 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 ASTN1O14525 1302 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 ATRNL1Q5VV63 1379 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 KAT6AQ92794 2004 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 A0A0G2JND7 137 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 E7ESA3 106 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 F8W735 103 aaPredicted RBP6.95□□□□□ -1.3
USP28-207ENST00000538475 GOLGA8TH3BQL2 631 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 TBCAO75347 108 aaKnown RBP6.95□□□□□ -1.3
USP28-207ENST00000538475 BAG2O95816 211 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 LDHCP07864 332 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 H2AFB1P0C5Y9 115 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 H2AFB2P0C5Z0 115 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 FAM58BPP0C7Q3 252 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 GOLGA8HP0CJ92 632 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 TSPY3P0CV98 308 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 TSPY8P0CW00 308 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 GLB1P16278 677 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 PTPN2P17706 415 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 KRT4P19013 534 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 HMOX2P30519 316 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 GRIA2P42262 883 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 ETV4P43268 484 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 KCNJ1P48048 391 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 ALDH3B2P48448 385 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 NEK2P51955 445 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 ARL4CP56559 192 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 MYL7Q01449 175 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 RELAQ04206 551 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 AP3B2Q13367 1082 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 MSLNQ13421 630 aaPredicted RBP6.95□□□□□ -1.3
USP28-207ENST00000538475 TRPC3Q13507 836 aa6.95□□□□□ -1.3
USP28-207ENST00000538475 DUOXA2Q1HG44 320 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms