RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 ALG6Q9Y672 507 aa11.13□□□□□ -0.63
SOX6-213ENST00000530378 CCDC195A0A1B0GUA6 201 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 A0A1W2PRU2 124 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 M0QYT0 321 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 ATP1A1P05023 1023 aaKnown RBP11.12□□□□□ -0.63
SOX6-213ENST00000530378 HMBSP08397 361 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 CCR2P41597 374 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 CLUL1Q15846 466 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 SMTNL2Q2TAL5 461 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 C10orf120Q5SQS8 335 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 TXNRD3NBQ6F5E7 133 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 C11orf63Q6NUN7 778 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 SCYL2Q6P3W7 929 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 GRASPQ7Z6J2 395 aaPredicted RBP11.12□□□□□ -0.63
SOX6-213ENST00000530378 TMEM150AQ86TG1 271 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 MON1AQ86VX9 555 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 FAM131BQ86XD5 332 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 TMC8Q8IU68 726 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 ARFGAP1Q8N6T3 406 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 TRIM58Q8NG06 486 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 ING5Q8WYH8 240 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 CASP10Q92851 521 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 ZNF707Q96C28 371 aaPredicted RBP11.12□□□□□ -0.63
SOX6-213ENST00000530378 NACA2Q9H009 215 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 ZWILCHQ9H900 591 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 PIDD1Q9HB75 910 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 IL21Q9HBE4 155 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 ASAH2Q9NR71 780 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 TMPRSS4Q9NRS4 437 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 GPATCH2LQ9NWQ4 482 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 DDIT4Q9NX09 232 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 TRPM5Q9NZQ8 1165 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 DNMT3BQ9UBC3 853 aaKnown RBP11.12□□□□□ -0.63
SOX6-213ENST00000530378 RASAL2Q9UJF2 1139 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 MAFFQ9ULX9 164 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 MTCH2Q9Y6C9 303 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 FAM92AA1XBS5 289 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 ZNF840PA6NDX5 716 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 SCAMP3O14828 347 aaKnown RBP11.12□□□□□ -0.63
SOX6-213ENST00000530378 TLR5O60602 858 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 LRCH4O75427 683 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 SCNN1AP37088 669 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 HADHBP55084 474 aaKnown RBP11.12□□□□□ -0.63
SOX6-213ENST00000530378 TCEAL1Q15170 157 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 LLGL1Q15334 1064 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 CCDC85BQ15834 202 aaPredicted RBP11.12□□□□□ -0.63
SOX6-213ENST00000530378 SLC5A9Q2M3M2 681 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 KCNT1Q5JUK3 1230 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 ZFYVE27Q5T4F4 411 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 TXNDC8Q6A555 127 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 CC2D1AQ6P1N0 951 aaPredicted RBP11.12□□□□□ -0.63
SOX6-213ENST00000530378 GAREM2Q75VX8 874 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 NT5DC3Q86UY8 548 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 RNF139Q8WU17 664 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 MYLIPQ8WY64 445 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 SMG7Q92540 1137 aaKnown RBP11.12□□□□□ -0.63
SOX6-213ENST00000530378 KRT35Q92764 455 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 PEBP4Q96S96 227 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 CNPY3Q9BT09 278 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 DDX23Q9BUQ8 820 aaKnown RBP11.12□□□□□ -0.63
SOX6-213ENST00000530378 ATXN3LQ9H3M9 355 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 ABCC13Q9NSE7 274 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 PIGVQ9NUD9 493 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.12□□□□□ -0.63
SOX6-213ENST00000530378 ASNSD1Q9NWL6 643 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 CLDND1Q9NY35 253 aa11.12□□□□□ -0.63
SOX6-213ENST00000530378 HELZP42694 1942 aaKnown RBP11.11□□□□□ -0.63
SOX6-213ENST00000530378 DPYSL4O14531 572 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 ZNF500O60304 480 aaPredicted RBP11.11□□□□□ -0.63
SOX6-213ENST00000530378 XYLBO75191 536 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 TBX10O75333 385 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 TRUB2O95900 331 aaKnown RBP11.11□□□□□ -0.63
SOX6-213ENST00000530378 RHOP08100 348 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 GLI1P08151 1106 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 IRF1P10914 325 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 IL1R2P27930 398 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 MIPP30301 263 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 CXCR5P32302 372 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 NOS2P35228 1153 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 GGCXP38435 758 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 HDAC4P56524 1084 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 ETF1P62495 437 aaKnown RBP11.11□□□□□ -0.63
SOX6-213ENST00000530378 DLX2Q07687 328 aaPredicted RBP11.11□□□□□ -0.63
SOX6-213ENST00000530378 SLC25A52Q3SY17 297 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 ATP13A4Q4VNC1 1196 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 DNTTIP2Q5QJE6 756 aaKnown RBP11.11□□□□□ -0.63
SOX6-213ENST00000530378 SCML4Q8N228 414 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 CCDC185Q8N715 623 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 ST13P5Q8NFI4 369 aaPredicted RBP11.11□□□□□ -0.63
SOX6-213ENST00000530378 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.11□□□□□ -0.63
SOX6-213ENST00000530378 PPM1EQ8WY54 764 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 TRMT2BQ96GJ1 504 aaKnown RBP11.11□□□□□ -0.63
SOX6-213ENST00000530378 MYRFLQ96LU7 910 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 SLC22A12Q96S37 553 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 CYP2S1Q96SQ9 504 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 NPY6RQ99463 290 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 LRRC3Q9BY71 257 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 MAGEB5Q9BZ81 275 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 PRKD2Q9BZL6 878 aa11.11□□□□□ -0.63
SOX6-213ENST00000530378 SMG9Q9H0W8 520 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms