RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 SPDL1Q96EA4 605 aa13.55□□□□□ -0.24
RBM39-243ENST00000528062 CPB2Q96IY4 423 aa13.55□□□□□ -0.24
RBM39-243ENST00000528062 SLC24A3Q9HC58 644 aa13.55□□□□□ -0.24
RBM39-243ENST00000528062 PRDM5Q9NQX1 630 aaPredicted RBP13.55□□□□□ -0.24
RBM39-243ENST00000528062 TJP2Q9UDY2 1190 aa13.55□□□□□ -0.24
RBM39-243ENST00000528062 LRRC42Q9Y546 428 aa13.55□□□□□ -0.24
RBM39-243ENST00000528062 H0YCG3 227 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 M0QZ92 97 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 MGEA5O60502 916 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 TMEM63AO94886 807 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 CALB1P05937 261 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 IL1R2P27930 398 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 TNFSF9P41273 254 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 NRLP54845 237 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 KCNT1Q5JUK3 1230 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 FAM182AQ5T1J6 154 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 EEF1DP3Q658K8 133 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 RFWD3Q6PCD5 774 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 ADGRD1Q6QNK2 874 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 C3orf62Q6ZUJ4 267 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 C7orf61Q8IZ16 206 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 ENDOVQ8N8Q3 282 aaKnown RBP13.54□□□□□ -0.24
RBM39-243ENST00000528062 MICAL1Q8TDZ2 1067 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 PYROXD1Q8WU10 500 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 DCAKDQ8WVC6 231 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 PRR11Q96HE9 360 aaPredicted RBP13.54□□□□□ -0.24
RBM39-243ENST00000528062 TLE6Q9H808 572 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 PTPRHQ9HD43 1115 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 SSU72Q9NP77 194 aaKnown RBP13.54□□□□□ -0.24
RBM39-243ENST00000528062 PRMT7Q9NVM4 692 aaPredicted RBP13.54□□□□□ -0.24
RBM39-243ENST00000528062 ST3GAL5Q9UNP4 418 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 UPP2O95045 317 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 ASS1P00966 412 aaKnown RBP13.54□□□□□ -0.24
RBM39-243ENST00000528062 PROZP22891 400 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 RPL22P35268 128 aaKnown RBP13.54□□□□□ -0.24
RBM39-243ENST00000528062 TRIM68Q6AZZ1 485 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 TSHZ1Q6ZSZ6 1077 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 BANPQ8N9N5 519 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 FBXO36Q8NEA4 188 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 ACO2Q99798 780 aaKnown RBP13.54□□□□□ -0.24
RBM39-243ENST00000528062 ACSS3Q9H6R3 686 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 ZWILCHQ9H900 591 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 PPCSQ9HAB8 311 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 KCNG1Q9UIX4 513 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 PADI3Q9ULW8 664 aa13.54□□□□□ -0.24
RBM39-243ENST00000528062 TIMP1P01033 207 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 CD48P09326 243 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 PTPN4P29074 926 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 RFC1P35251 1148 aaPredicted RBP13.53□□□□□ -0.24
RBM39-243ENST00000528062 MYL6P60660 151 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 SLC25A11Q02978 314 aaKnown RBP13.53□□□□□ -0.24
RBM39-243ENST00000528062 IGDCC3Q8IVU1 814 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 PPIL6Q8IXY8 311 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 ATP11CQ8NB49 1132 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 LINC01599Q8WXQ3 324 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 PDZD7Q9H5P4 517 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 LNPEPQ9UIQ6 1025 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 FAM189A1O60320 539 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 CST8O60676 142 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 LSM8O95777 96 aaKnown RBP13.53□□□□□ -0.24
RBM39-243ENST00000528062 CXCL10P02778 98 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 CCNHP51946 323 aaPredicted RBP13.53□□□□□ -0.24
RBM39-243ENST00000528062 ARL4CP56559 192 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 PIGHQ14442 188 aaPredicted RBP13.53□□□□□ -0.24
RBM39-243ENST00000528062 SPDYAQ5MJ70 313 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 WASHC2DQ5SRD0 308 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 SLFN12LQ6IEE8 588 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 PPP1R2P3Q6NXS1 205 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 EP400NLQ6ZTU2 488 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 LRRC6Q86X45 466 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 UNC45BQ8IWX7 931 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 NIPA2Q8N8Q9 360 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 JOSD2Q8TAC2 188 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 CADM1Q9BY67 442 aaKnown RBP13.53□□□□□ -0.24
RBM39-243ENST00000528062 MTMR12Q9C0I1 747 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 CISHQ9NSE2 258 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 ARL8BQ9NVJ2 186 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 DDX56Q9NY93 547 aaKnown RBP13.53□□□□□ -0.24
RBM39-243ENST00000528062 FETUBQ9UGM5 382 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 SQORQ9Y6N5 450 aa13.53□□□□□ -0.24
RBM39-243ENST00000528062 CITO14578 2027 aa13.52□□□□□ -0.24
RBM39-243ENST00000528062 A6NHS1 94 aa13.52□□□□□ -0.24
RBM39-243ENST00000528062 E7ESA3 106 aa13.52□□□□□ -0.24
RBM39-243ENST00000528062 LRCH4O75427 683 aa13.52□□□□□ -0.24
RBM39-243ENST00000528062 WEE2P0C1S8 567 aa13.52□□□□□ -0.24
RBM39-243ENST00000528062 PTDSS1P48651 473 aaKnown RBP13.52□□□□□ -0.24
RBM39-243ENST00000528062 KHDC1Q4VXA5 237 aaKnown RBP13.52□□□□□ -0.24
RBM39-243ENST00000528062 UBXN11Q5T124 520 aa13.52□□□□□ -0.24
RBM39-243ENST00000528062 FYB2Q5VWT5 728 aa13.52□□□□□ -0.24
RBM39-243ENST00000528062 CAPRIN2Q6IMN6 1127 aaKnown RBP13.52□□□□□ -0.24
RBM39-243ENST00000528062 ANO7Q6IWH7 933 aa13.52□□□□□ -0.24
RBM39-243ENST00000528062 CATSPER4Q7RTX7 472 aa13.52□□□□□ -0.24
RBM39-243ENST00000528062 TMEM35BQ8NCS4 154 aa13.52□□□□□ -0.24
RBM39-243ENST00000528062 MRPL4Q9BYD3 311 aaKnown RBP13.52□□□□□ -0.24
RBM39-243ENST00000528062 CYTH4Q9UIA0 394 aa13.52□□□□□ -0.24
RBM39-243ENST00000528062 CORO1CQ9ULV4 474 aaPredicted RBP13.52□□□□□ -0.24
RBM39-243ENST00000528062 CEP290O15078 2479 aa13.52□□□□□ -0.24
RBM39-243ENST00000528062 PDCD11Q14690 1871 aaKnown RBP13.52□□□□□ -0.25
RBM39-243ENST00000528062 A0A0G2JND7 137 aa13.52□□□□□ -0.25
RBM39-243ENST00000528062 E7ENQ6 273 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms