RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ROBO3Q96MS0 1386 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 SRCAPQ6ZRS2 3230 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 A0A1B0GTW7 788 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 CCDC69A6NI79 296 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 SLC16A6O15403 523 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 SIPA1L1O43166 1804 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 AKAP10O43572 662 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 NMT2O60551 498 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 HAUS5O94927 633 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 PRSS23O95084 383 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 CELF2O95319 508 aaKnown RBP5.1□□□□□ -1.59
USP48-211ENST00000526044 CFIP05156 583 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 MALP21145 153 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 LIFRP42702 1097 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 MCM2P49736 904 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 RAB27AP51159 221 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 FKBP1BP68106 108 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 FSTL1Q12841 308 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 PIN1Q13526 163 aaPredicted RBP5.1□□□□□ -1.59
USP48-211ENST00000526044 WTAPQ15007 396 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 PTPAQ15257 358 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 ANKRD1Q15327 319 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 SPDYE7PQ495Y7 208 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 DDX60LQ5H9U9 1706 aaKnown RBP5.1□□□□□ -1.59
USP48-211ENST00000526044 IFIT1BQ5T764 474 aaKnown RBP5.1□□□□□ -1.59
USP48-211ENST00000526044 CST9Q5W186 159 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 ARMC6Q6NXE6 501 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 KCNV1Q6PIU1 500 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 SCYL3Q8IZE3 742 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 FBXL16Q8N461 479 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 AMER2Q8N7J2 671 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 TBC1D15Q8TC07 691 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 PROKR1Q8TCW9 393 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 NUP133Q8WUM0 1156 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 NEU4Q8WWR8 484 aaPredicted RBP5.1□□□□□ -1.59
USP48-211ENST00000526044 LARP4BQ92615 738 aaKnown RBP5.1□□□□□ -1.59
USP48-211ENST00000526044 ANKS1AQ92625 1134 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 ZKSCAN4Q969J2 545 aaPredicted RBP5.1□□□□□ -1.59
USP48-211ENST00000526044 TCEANC2Q96MN5 208 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 TRPM7Q96QT4 1865 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 VRK1Q99986 396 aaPredicted RBP5.1□□□□□ -1.59
USP48-211ENST00000526044 LRRC2Q9BYS8 371 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 GBA2Q9HCG7 927 aaPredicted RBP5.1□□□□□ -1.59
USP48-211ENST00000526044 IL17RBQ9NRM6 502 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 MTMR4Q9NYA4 1195 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 NYAP2Q9P242 653 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 ING1Q9UK53 422 aaPredicted RBP5.1□□□□□ -1.59
USP48-211ENST00000526044 PNMA8BQ9ULN7 279 aaPredicted RBP5.1□□□□□ -1.59
USP48-211ENST00000526044 HS3ST4Q9Y661 456 aa5.1□□□□□ -1.59
USP48-211ENST00000526044 ATAD5Q96QE3 1844 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 WDR33Q9C0J8 1336 aaKnown RBP5.09□□□□□ -1.59
USP48-211ENST00000526044 IGKV6D-41A0A0C4DH26 115 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 CDHR4A6H8M9 788 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 C19orf81C9J6K1 198 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 SH2B2O14492 632 aaPredicted RBP5.09□□□□□ -1.59
USP48-211ENST00000526044 CREB3O43889 395 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 SLC43A1O75387 559 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 ARIH2O95376 493 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 TTLL1O95922 423 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 CD1AP06126 327 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 SBK3P0C264 359 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 TOP1P11387 765 aaKnown RBP5.09□□□□□ -1.59
USP48-211ENST00000526044 EEF2P13639 858 aaKnown RBP5.09□□□□□ -1.59
USP48-211ENST00000526044 DDX6P26196 483 aaKnown RBP eCLIP5.09□□□□□ -1.59
USP48-211ENST00000526044 SMARCA1P28370 1054 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 NOVP48745 357 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 INHBEP58166 350 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 SNAPC2Q13487 334 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 PGS1Q32NB8 556 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 ODR4Q5SWX8 454 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 FOXR2Q6PJQ5 311 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 MOB2Q70IA6 237 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 CATIPQ7Z7H3 387 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 ERO1BQ86YB8 467 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 ARHGEF19Q8IW93 802 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 ULK2Q8IYT8 1036 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 TMEM132CQ8N3T6 1108 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 ENAHQ8N8S7 591 aaPredicted RBP5.09□□□□□ -1.59
USP48-211ENST00000526044 CPEB3Q8NE35 698 aaKnown RBP5.09□□□□□ -1.59
USP48-211ENST00000526044 JPH3Q8WXH2 748 aaPredicted RBP5.09□□□□□ -1.59
USP48-211ENST00000526044 ZNF274Q96GC6 653 aaPredicted RBP5.09□□□□□ -1.59
USP48-211ENST00000526044 MARS2Q96GW9 593 aaKnown RBP5.09□□□□□ -1.59
USP48-211ENST00000526044 ZSCAN31Q96LW9 406 aaPredicted RBP5.09□□□□□ -1.59
USP48-211ENST00000526044 TMEM47Q9BQJ4 181 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 PACSIN1Q9BY11 444 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 AGXT2Q9BYV1 514 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 RHOBTB2Q9BYZ6 727 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 GTPBP4Q9BZE4 634 aaKnown RBP5.09□□□□□ -1.59
USP48-211ENST00000526044 KAT14Q9H8E8 782 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 AS3MTQ9HBK9 375 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 JKAMPQ9P055 326 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 DKK2Q9UBU2 259 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 ZNF180Q9UJW8 692 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 NAP1L2Q9ULW6 460 aaPredicted RBP5.09□□□□□ -1.59
USP48-211ENST00000526044 STX8Q9UNK0 236 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 ZHX2Q9Y6X8 837 aa5.09□□□□□ -1.59
USP48-211ENST00000526044 MYH4Q9Y623 1939 aa5.09□□□□□ -1.6
USP48-211ENST00000526044 UTRNP46939 3433 aa5.09□□□□□ -1.6
USP48-211ENST00000526044 PASKQ96RG2 1323 aa5.08□□□□□ -1.6
USP48-211ENST00000526044 KLF18A0A0U1RQI7 1052 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms