RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 SELENOOQ9BVL4 669 aa19.56■□□□□ 0.72
PTPRK-218ENST00000525459 SMOC2Q9H3U7 446 aa19.56■□□□□ 0.72
PTPRK-218ENST00000525459 MRPL47Q9HD33 250 aaKnown RBP19.56■□□□□ 0.72
PTPRK-218ENST00000525459 PARVAQ9NVD7 372 aa19.56■□□□□ 0.72
PTPRK-218ENST00000525459 ANHXE9PGG2 379 aa19.56■□□□□ 0.72
PTPRK-218ENST00000525459 DESP17661 470 aa19.56■□□□□ 0.72
PTPRK-218ENST00000525459 NOS2P35228 1153 aa19.56■□□□□ 0.72
PTPRK-218ENST00000525459 COG7P83436 770 aa19.56■□□□□ 0.72
PTPRK-218ENST00000525459 DEPDC1BQ8WUY9 529 aa19.56■□□□□ 0.72
PTPRK-218ENST00000525459 ZNF653Q96CK0 615 aa19.56■□□□□ 0.72
PTPRK-218ENST00000525459 ZSWIM3Q96MP5 696 aa19.56■□□□□ 0.72
PTPRK-218ENST00000525459 SERPINB11Q96P15 392 aa19.56■□□□□ 0.72
PTPRK-218ENST00000525459 C19orf67A6NJJ6 358 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 GOLGA8SH3BPF8 625 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 LCA5LO95447 670 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 KRT3P12035 628 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 MATKP42679 507 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 PGFP49763 221 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 HTR4Q13639 388 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 SPA17Q15506 151 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 C2CD6Q53TS8 623 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 EDEM1Q92611 657 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 PDLIM2Q96JY6 352 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 SLC22A12Q96S37 553 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 RNF38Q9H0F5 515 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 METTL5Q9NRN9 209 aaKnown RBP19.55■□□□□ 0.72
PTPRK-218ENST00000525459 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.55■□□□□ 0.72
PTPRK-218ENST00000525459 MARCH2Q9P0N8 246 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 TMEM59LQ9UK28 342 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 HBS1LQ9Y450 684 aaKnown RBP19.55■□□□□ 0.72
PTPRK-218ENST00000525459 C5orf42Q9H799 3197 aa19.55■□□□□ 0.72
PTPRK-218ENST00000525459 MYO10Q9HD67 2058 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 SIGLEC16A6NMB1 481 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 SP100P23497 879 aaPredicted RBP19.54■□□□□ 0.72
PTPRK-218ENST00000525459 RRM1P23921 792 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 FCARP24071 287 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 USP4Q13107 963 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 DCAF6Q58WW2 860 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 PLEKHA7Q6IQ23 1121 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 CTNNBL1Q8WYA6 563 aaPredicted RBP19.54■□□□□ 0.72
PTPRK-218ENST00000525459 USP13Q92995 863 aaPredicted RBP19.54■□□□□ 0.72
PTPRK-218ENST00000525459 CNOT8Q9UFF9 292 aaKnown RBP19.54■□□□□ 0.72
PTPRK-218ENST00000525459 RASAL2Q9UJF2 1139 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 INTUQ9ULD6 942 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 CPQQ9Y646 472 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 EIF3CLB5ME19 914 aaKnown RBP19.54■□□□□ 0.72
PTPRK-218ENST00000525459 PRAMEF12O95522 483 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 FYNP06241 537 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 EFEMP1Q12805 493 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 MTA1Q13330 715 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 DEFB106AQ8N104 65 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 TXLNBQ8N3L3 684 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 PLD4Q96BZ4 506 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 CYP2S1Q96SQ9 504 aa19.54■□□□□ 0.72
PTPRK-218ENST00000525459 EIF3CQ99613 913 aaKnown RBP19.54■□□□□ 0.72
PTPRK-218ENST00000525459 TCRBV5S1A1TA0A578 114 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 NDUFA10O95299 355 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 H2AFZP0C0S5 128 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 GBP1P32455 592 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 GPC5P78333 572 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 RING1Q06587 406 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 DCUN1D2Q6PH85 259 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 H2AFVQ71UI9 128 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 TMEM139Q8IV31 216 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 BPIFB1Q8TDL5 484 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 DQX1Q8TE96 717 aaKnown RBP19.53■□□□□ 0.72
PTPRK-218ENST00000525459 FGF14Q92915 247 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 KHSRPQ92945 711 aaKnown RBP eCLIP19.53■□□□□ 0.722e-6■■□□□ 14.2
PTPRK-218ENST00000525459 SPTLC3Q9NUV7 552 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 THG1LQ9NWX6 298 aaKnown RBP19.53■□□□□ 0.72
PTPRK-218ENST00000525459 LCMT1Q9UIC8 334 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 LSM7Q9UK45 103 aaKnown RBP19.53■□□□□ 0.72
PTPRK-218ENST00000525459 NAALADL1Q9UQQ1 740 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 PAXBP1Q9Y5B6 917 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 EPN1Q9Y6I3 576 aaPredicted RBP19.53■□□□□ 0.72
PTPRK-218ENST00000525459 NUMBLQ9Y6R0 609 aa19.53■□□□□ 0.72
PTPRK-218ENST00000525459 SOWAHDA6NJG2 315 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 GRAP2O75791 330 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 TMEM253P0C7T8 217 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 ABCB4P21439 1286 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 SDC4P31431 198 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 TAF5Q15542 800 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 ZNF77Q15935 545 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 SLC25A52Q3SY17 297 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 PPP1R15BQ5SWA1 713 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 POTEHQ6S545 545 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 PARM1Q6UWI2 310 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 MIB1Q86YT6 1006 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 MFSD6LQ8IWD5 586 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 PGAP3Q96FM1 320 aaPredicted RBP19.52■□□□□ 0.72
PTPRK-218ENST00000525459 ZFRQ96KR1 1074 aaKnown RBP19.52■□□□□ 0.72
PTPRK-218ENST00000525459 DDX23Q9BUQ8 820 aaKnown RBP19.52■□□□□ 0.72
PTPRK-218ENST00000525459 KLF16Q9BXK1 252 aaPredicted RBP19.52■□□□□ 0.72
PTPRK-218ENST00000525459 DCLK3Q9C098 648 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 TLR6Q9Y2C9 796 aa19.52■□□□□ 0.72
PTPRK-218ENST00000525459 E2F8A0AVK6 867 aa19.51■□□□□ 0.71
PTPRK-218ENST00000525459 HEPACAM2A8MVW5 462 aa19.51■□□□□ 0.71
PTPRK-218ENST00000525459 ARHGAP6O43182 974 aa19.51■□□□□ 0.71
PTPRK-218ENST00000525459 TBX18O95935 607 aa19.51■□□□□ 0.71
PTPRK-218ENST00000525459 F9P00740 461 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms