RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 CCZ1BP86790 482 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 CCZ1P86791 482 aaPredicted RBP6.91□□□□□ -1.3
NUP98-213ENST00000524563 LRMPQ12912 555 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 ORC1Q13415 861 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 EML3Q32P44 896 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 FILIP1LQ4L180 1135 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 HSP90AA4PQ58FG1 418 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 MDH1BQ5I0G3 518 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 SH3PXD2AQ5TCZ1 1133 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 PMS2CLQ68D20 193 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 KIAA1211LQ6NV74 962 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 FAM171BQ6P995 826 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 UNQ6494/PRO21346Q6UXR6 183 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 LPCAT2Q7L5N7 544 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 SYT13Q7L8C5 426 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 DDX42Q86XP3 938 aaKnown RBP eCLIP6.91□□□□□ -1.3
NUP98-213ENST00000524563 LRRC8AQ8IWT6 810 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 OR6B3Q8NGW1 331 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 MYCBPAPQ8TBZ2 947 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 HMGB4Q8WW32 186 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 FBXO32Q969P5 355 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 TRMT2BQ96GJ1 504 aaKnown RBP6.91□□□□□ -1.3
NUP98-213ENST00000524563 PCED1BQ96HM7 432 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 FUBP3Q96I24 572 aaKnown RBP eCLIP6.91□□□□□ -1.3
NUP98-213ENST00000524563 SLITRK1Q96PX8 696 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 TWNKQ96RR1 684 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 ARID3AQ99856 593 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 FAM83CQ9BQN1 747 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 NUSAP1Q9BXS6 441 aaKnown RBP6.91□□□□□ -1.3
NUP98-213ENST00000524563 IMPG2Q9BZV3 1241 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 NIF3L1Q9GZT8 377 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 POLMQ9NP87 494 aaPredicted RBP6.91□□□□□ -1.3
NUP98-213ENST00000524563 RXFP3Q9NSD7 469 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 TMEM30AQ9NV96 361 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 RAB20Q9NX57 234 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 MAGEC2Q9UBF1 373 aaPredicted RBP6.91□□□□□ -1.3
NUP98-213ENST00000524563 CDH9Q9ULB4 789 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 COQ4Q9Y3A0 265 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 PAXBP1Q9Y5B6 917 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 NUMA1Q14980 2115 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 CABIN1Q9Y6J0 2220 aa6.91□□□□□ -1.3
NUP98-213ENST00000524563 PCDH15Q96QU1 1955 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 TCRBV21S2A2A0A5A6 115 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 LNP1A1A4G5 178 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 BCLAF3A2AJT9 711 aaKnown RBP6.9□□□□□ -1.3
NUP98-213ENST00000524563 OTOL1A6NHN0 477 aaPredicted RBP6.9□□□□□ -1.3
NUP98-213ENST00000524563 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.9□□□□□ -1.3
NUP98-213ENST00000524563 CILPO75339 1184 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 AFPP02771 609 aaKnown RBP6.9□□□□□ -1.3
NUP98-213ENST00000524563 CYP17A1P05093 508 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 IRF1P10914 325 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 ADH5P11766 374 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 ATP1A3P13637 1013 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 P4HA1P13674 534 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 HMGA1P17096 107 aaKnown RBP6.9□□□□□ -1.3
NUP98-213ENST00000524563 HDCP19113 662 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 CD58P19256 250 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 TRIM21P19474 475 aaKnown RBP6.9□□□□□ -1.3
NUP98-213ENST00000524563 BCKDHBP21953 392 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 TIE1P35590 1138 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 GNL1P36915 607 aaPredicted RBP6.9□□□□□ -1.3
NUP98-213ENST00000524563 MAGEA11P43364 429 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 GALK1P51570 392 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 NDST1P52848 882 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 CACNA2D1P54289 1103 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 INCA1Q0VD86 236 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 KCNH2Q12809 1159 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 CFAP221Q4G0U5 840 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 TRIM61Q5EBN2 209 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 EOGTQ5NDL2 527 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 LYSMD4Q5XG99 296 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 BTBD8Q5XKL5 378 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 DENND5BQ6ZUT9 1274 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 TMEM150AQ86TG1 271 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 HDDC3Q8N4P3 179 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 ALLCQ8N6M5 410 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 UBR7Q8N806 425 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 TXNDC5Q8NBS9 432 aaKnown RBP6.9□□□□□ -1.3
NUP98-213ENST00000524563 B3GALNT2Q8NCR0 500 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 MDGA1Q8NFP4 955 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 LMO3Q8TAP4 145 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 RIN3Q8TB24 985 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 ZCCHC14Q8WYQ9 949 aaKnown RBP6.9□□□□□ -1.3
NUP98-213ENST00000524563 TATDN2Q93075 761 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 SLC22A12Q96S37 553 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 MED10Q9BTT4 135 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 GTPBP2Q9BX10 602 aaKnown RBP6.9□□□□□ -1.3
NUP98-213ENST00000524563 LSM14BQ9BX40 385 aaKnown RBP6.9□□□□□ -1.3
NUP98-213ENST00000524563 DUSP15Q9H1R2 295 aaPredicted RBP6.9□□□□□ -1.3
NUP98-213ENST00000524563 SLC32A1Q9H598 525 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 ARHGEF4Q9NR80 690 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 SAMSN1Q9NSI8 373 aaKnown RBP6.9□□□□□ -1.3
NUP98-213ENST00000524563 CFAP97Q9P2B7 532 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 MMP17Q9ULZ9 603 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 ARHGAP26Q9UNA1 814 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 SH3BP1Q9Y3L3 701 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 CPQQ9Y646 472 aa6.9□□□□□ -1.3
NUP98-213ENST00000524563 ADAMTS20P59510 1910 aa6.89□□□□□ -1.31
NUP98-213ENST00000524563 KNL1Q8NG31 2342 aa6.89□□□□□ -1.31
NUP98-213ENST00000524563 SOBPA7XYQ1 873 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms