RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 SNRNP35Q16560 246 aaKnown RBP6.36□□□□□ -1.39
SPIDR-216ENST00000521918 CPSF6Q16630 551 aaKnown RBP eCLIP6.36□□□□□ -1.39
SPIDR-216ENST00000521918 KNOP1Q1ED39 458 aaKnown RBP6.36□□□□□ -1.39
SPIDR-216ENST00000521918 SLC5A9Q2M3M2 681 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 LMBRD2Q68DH5 695 aaPredicted RBP6.36□□□□□ -1.39
SPIDR-216ENST00000521918 OVOS1Q6IE37 1185 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 LETMD1Q6P1Q0 360 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 KRBA2Q6ZNG9 492 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 GET4Q7L5D6 327 aaPredicted RBP6.36□□□□□ -1.39
SPIDR-216ENST00000521918 GRASPQ7Z6J2 395 aaPredicted RBP6.36□□□□□ -1.39
SPIDR-216ENST00000521918 TMC8Q8IU68 726 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 NELFCDQ8IXH7 590 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 SYCP3Q8IZU3 236 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 TTC9BQ8N6N2 239 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 LRRC52Q8N7C0 313 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 ENGASEQ8NFI3 743 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 OR5B17Q8NGF7 314 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 GIMAP7Q8NHV1 300 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 ITFG1Q8TB96 612 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 PLEKHO2Q8TD55 490 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 CYB5D2Q8WUJ1 264 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 SEC16BQ96JE7 1060 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 HEXIM2Q96MH2 286 aaKnown RBP6.36□□□□□ -1.39
SPIDR-216ENST00000521918 TMEM209Q96SK2 561 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 PKMYT1Q99640 499 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 MIPEPQ99797 713 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 KCNK12Q9HB15 430 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 DMAC2Q9NW81 257 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 CEP72Q9P209 647 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 CGNQ9P2M7 1197 aaKnown RBP6.36□□□□□ -1.39
SPIDR-216ENST00000521918 ITGA11Q9UKX5 1188 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 MAFFQ9ULX9 164 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 L1RE1Q9UN81 338 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 DUSP12Q9UNI6 340 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 YIPF1Q9Y548 306 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 U3KQE9 123 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 COL4A2P08572 1712 aa6.36□□□□□ -1.39
SPIDR-216ENST00000521918 F5P12259 2224 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 ZNF233A6NK53 670 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 KPNA7A9QM74 516 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 CYB561D2O14569 222 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 CLIC2O15247 247 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 NARSO43776 548 aaKnown RBP6.35□□□□□ -1.39
SPIDR-216ENST00000521918 MOSPD3O75425 235 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 ZNF202O95125 648 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 PDGFBP01127 241 aaPredicted RBP6.35□□□□□ -1.39
SPIDR-216ENST00000521918 RPN1P04843 607 aaKnown RBP6.35□□□□□ -1.39
SPIDR-216ENST00000521918 RHOP08100 348 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 LAMP2P13473 410 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 CEBPBP17676 345 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 FCARP24071 287 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 PNPLA4P41247 253 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 NUCB2P80303 420 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 TFAMQ00059 246 aaKnown RBP6.35□□□□□ -1.39
SPIDR-216ENST00000521918 CYP24A1Q07973 514 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 PSMD6Q15008 389 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 SV2CQ496J9 727 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 PABPC1LQ4VXU2 614 aaKnown RBP6.35□□□□□ -1.39
SPIDR-216ENST00000521918 ZCWPW2Q504Y3 356 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 CDCP2Q5VXM1 449 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 WSCD1Q658N2 575 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 CENPPQ6IPU0 288 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 DSTYKQ6XUX3 929 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 CCDC81Q6ZN84 652 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 OSTM1Q86WC4 334 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 WDR49Q8IV35 697 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 UBALD2Q8IYN6 164 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 PDCL2Q8N4E4 241 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 XXYLT1Q8NBI6 393 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 RBBP8NLQ8NC74 664 aaPredicted RBP6.35□□□□□ -1.39
SPIDR-216ENST00000521918 DNAJB8Q8NHS0 232 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 SPATA20Q8TB22 786 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 SPATA18Q8TC71 538 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 KBTBD7Q8WVZ9 684 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 RSAD2Q8WXG1 361 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 FGF13Q92913 245 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 FGF14Q92915 247 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 TCEAL4Q96EI5 215 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 ZNF560Q96MR9 790 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 CGRRF1Q99675 332 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 OSBPL1AQ9BXW6 950 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 ZCWPW1Q9H0M4 648 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 KIAA1586Q9HCI6 787 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 EXOC1Q9NV70 894 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 INTS13Q9NVM9 706 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 GDAP2Q9NXN4 497 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.35□□□□□ -1.39
SPIDR-216ENST00000521918 IGSF9Q9P2J2 1179 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 HSFX1Q9UBD0 423 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 CDH7Q9ULB5 785 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 ZFP37Q9Y6Q3 630 aaPredicted RBP6.35□□□□□ -1.39
SPIDR-216ENST00000521918 FRYLO94915 3013 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 PTPRDP23468 1912 aa6.35□□□□□ -1.39
SPIDR-216ENST00000521918 KIF26AQ9ULI4 1882 aaPredicted RBP6.34□□□□□ -1.39
SPIDR-216ENST00000521918 NCANO14594 1321 aa6.34□□□□□ -1.39
SPIDR-216ENST00000521918 COL4A3Q01955 1670 aa6.34□□□□□ -1.39
SPIDR-216ENST00000521918 LRRIQ3A6PVS8 624 aaPredicted RBP6.34□□□□□ -1.39
SPIDR-216ENST00000521918 PDXKO00764 312 aa6.34□□□□□ -1.39
SPIDR-216ENST00000521918 GABRDO14764 452 aa6.34□□□□□ -1.39
SPIDR-216ENST00000521918 LRG1P02750 347 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms