RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 CAPN9O14815 690 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 GPR37L1O60883 481 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 HSF2BPO75031 334 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 ERBB2P04626 1255 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 UNGP13051 313 aaPredicted RBP14.92□□□□□ -0.02
NUP54-216ENST00000514901 NCAM1P13591 858 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 AMPD2Q01433 879 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 SLC6A3Q01959 620 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 KLHL30Q0D2K2 578 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 NR1H3Q13133 447 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 MLF2Q15773 248 aaPredicted RBP14.92□□□□□ -0.02
NUP54-216ENST00000514901 ITPRIPL2Q3MIP1 535 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 NAA35Q5VZE5 725 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 OR6B2Q6IFH4 312 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 MSANTD2Q6P1R3 559 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 HFE2Q6ZVN8 426 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 HTR3DQ70Z44 454 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 BMP8AQ7Z5Y6 402 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 GAS2L3Q86XJ1 694 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 MIB1Q86YT6 1006 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 TTC16Q8NEE8 873 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 CPLX3Q8WVH0 158 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 CPA5Q8WXQ8 436 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 EDEM1Q92611 657 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 ATP2A3Q93084 1043 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 DCLK3Q9C098 648 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 ARHGEF3Q9NR81 526 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 TMEM51Q9NW97 253 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 RASAL2Q9UJF2 1139 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 NUDT5Q9UKK9 219 aa14.92□□□□□ -0.02
NUP54-216ENST00000514901 HBS1LQ9Y450 684 aaKnown RBP14.92□□□□□ -0.02
NUP54-216ENST00000514901 MAN2B1O00754 1011 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 NFATC1O95644 943 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 GYPCP04921 128 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 MMP8P22894 467 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 NSFP46459 744 aaKnown RBP14.91□□□□□ -0.02
NUP54-216ENST00000514901 STARD6P59095 220 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 CENPCQ03188 943 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 RUNX3Q13761 415 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 CLEC16AQ2KHT3 1053 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 OLFML1Q6UWY5 402 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 FAM183BPQ6ZVS7 135 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 SLC26A9Q7LBE3 791 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 PHF13Q86YI8 300 aaPredicted RBP14.91□□□□□ -0.02
NUP54-216ENST00000514901 SIX5Q8N196 739 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 CPA6Q8N4T0 437 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 RIN3Q8TB24 985 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 PLD4Q96BZ4 506 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 ZFYVE19Q96K21 471 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 PCDHB18PQ96TA0 734 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 NELL2Q99435 816 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 MFSD1Q9H3U5 465 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 HAUS4Q9H6D7 363 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 SEPT11Q9NVA2 429 aaKnown RBP14.91□□□□□ -0.02
NUP54-216ENST00000514901 WDR35Q9P2L0 1181 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 CA14Q9ULX7 337 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 HELZP42694 1942 aaKnown RBP14.91□□□□□ -0.02
NUP54-216ENST00000514901 ZDBF2Q9HCK1 2354 aa14.91□□□□□ -0.02
NUP54-216ENST00000514901 SLC12A8A0AV02 714 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 MDM4O15151 490 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 STC2O76061 302 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 SERPING1P05155 500 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 FYNP06241 537 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 NNTQ13423 1086 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 TSR1Q2NL82 804 aaKnown RBP14.9□□□□□ -0.02
NUP54-216ENST00000514901 EML3Q32P44 896 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 TMEM31Q5JXX7 168 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 ZNF852Q6ZMS4 543 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 VPS36Q86VN1 386 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 RALGPS2Q86X27 583 aaPredicted RBP14.9□□□□□ -0.02
NUP54-216ENST00000514901 XYLT1Q86Y38 959 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 DRC7Q8IY82 874 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 ADGRG2Q8IZP9 1017 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 EXOC4Q96A65 974 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 PBXIP1Q96AQ6 731 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 SYT11Q9BT88 431 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 LINC00597Q9H2U6 94 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 EBF3Q9H4W6 596 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 ECT2Q9H8V3 914 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 HEBP1Q9NRV9 189 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 RRN3Q9NYV6 651 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 TJP2Q9UDY2 1190 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 MRPS17Q9Y2R5 130 aaKnown RBP14.9□□□□□ -0.02
NUP54-216ENST00000514901 WNT6Q9Y6F9 365 aa14.9□□□□□ -0.02
NUP54-216ENST00000514901 KRBA1A5PL33 1030 aa14.89□□□□□ -0.03
NUP54-216ENST00000514901 PRR33A8MZF0 331 aa14.89□□□□□ -0.03
NUP54-216ENST00000514901 CALB1P05937 261 aa14.89□□□□□ -0.03
NUP54-216ENST00000514901 IRF1P10914 325 aa14.89□□□□□ -0.03
NUP54-216ENST00000514901 GZMAP12544 262 aa14.89□□□□□ -0.03
NUP54-216ENST00000514901 HNRNPH3P31942 346 aaKnown RBP14.89□□□□□ -0.03
NUP54-216ENST00000514901 CASP14P31944 242 aa14.89□□□□□ -0.03
NUP54-216ENST00000514901 GBP1P32455 592 aa14.89□□□□□ -0.03
NUP54-216ENST00000514901 HARS2P49590 506 aaKnown RBP14.89□□□□□ -0.03
NUP54-216ENST00000514901 CDK17Q00537 523 aa14.89□□□□□ -0.03
NUP54-216ENST00000514901 TNK2Q07912 1038 aa14.89□□□□□ -0.03
NUP54-216ENST00000514901 TRIP4Q15650 581 aaPredicted RBP14.89□□□□□ -0.03
NUP54-216ENST00000514901 TRIM68Q6AZZ1 485 aa14.89□□□□□ -0.03
NUP54-216ENST00000514901 ACAD10Q6JQN1 1059 aa14.89□□□□□ -0.03
NUP54-216ENST00000514901 MMS22LQ6ZRQ5 1243 aa14.89□□□□□ -0.03
NUP54-216ENST00000514901 ARCQ7LC44 396 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms