RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 AMBRA1Q9C0C7 1298 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 PLEKHA5Q9HAU0 1116 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 TMEM74BQ9NUR3 256 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 TMLHEQ9NVH6 421 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 RNF181Q9P0P0 153 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 POLG2Q9UHN1 485 aa5.8□□□□□ -1.48
RFC1-216ENST00000514572 FANCD2Q9BXW9 1451 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 A0A1W2PPH5 198 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 M0QZQ0 153 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 TRIAP1O43715 76 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 WDR47O94967 919 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 HEXIM1O94992 359 aaKnown RBP5.79□□□□□ -1.48
RFC1-216ENST00000514572 RTN3O95197 1032 aaPredicted RBP5.79□□□□□ -1.48
RFC1-216ENST00000514572 GATA3P23771 443 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 PBX1P40424 430 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 SCNN1GP51170 649 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 FZD5Q13467 585 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 PRICKLE4Q2TBC4 344 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 TBRG1Q3YBR2 411 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 WDR45BQ5MNZ6 344 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 DEPDC1Q5TB30 811 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 SP5Q6BEB4 398 aaPredicted RBP5.79□□□□□ -1.48
RFC1-216ENST00000514572 FOXR2Q6PJQ5 311 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 CLEC9AQ6UXN8 241 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 IZUMO1Q8IYV9 350 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 SLC22A17Q8WUG5 538 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 OVCA2Q8WZ82 227 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 FAM136AQ96C01 138 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 RSPRY1Q96DX4 576 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 WDYHV1Q96HA8 205 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 BOD1Q96IK1 185 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 BRD8Q9H0E9 1235 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 NRDE2Q9H7Z3 1164 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 LIN7CQ9NUP9 197 aaKnown RBP5.79□□□□□ -1.48
RFC1-216ENST00000514572 JAG2Q9Y219 1238 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 DRG1Q9Y295 367 aaKnown RBP5.79□□□□□ -1.48
RFC1-216ENST00000514572 CYP46A1Q9Y6A2 500 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 FPGT-TNNI3KV9GXZ4 949 aa5.79□□□□□ -1.48
RFC1-216ENST00000514572 XDHP47989 1333 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 ANKRD18BA2A2Z9 1011 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 CAPN14A8MX76 684 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 PATE3B3GLJ2 98 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 F5H697 171 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 NUAK1O60285 661 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 ERN1O75460 977 aaKnown RBP5.78□□□□□ -1.48
RFC1-216ENST00000514572 RPS6KA4O75676 772 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 ERBB2P04626 1255 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 C8AP07357 584 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 PSMC2P35998 433 aaKnown RBP5.78□□□□□ -1.48
RFC1-216ENST00000514572 RBM5P52756 815 aaKnown RBP eCLIP5.78□□□□□ -1.48
RFC1-216ENST00000514572 PDCLQ13371 301 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 KCNJ12Q14500 433 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 LY6KQ17RY6 165 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 TBC1D10BQ4KMP7 808 aaPredicted RBP5.78□□□□□ -1.48
RFC1-216ENST00000514572 SLC9A4Q6AI14 798 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 FSTL5Q8N475 847 aaPredicted RBP5.78□□□□□ -1.48
RFC1-216ENST00000514572 ZNF808Q8N4W9 903 aaPredicted RBP5.78□□□□□ -1.48
RFC1-216ENST00000514572 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.78□□□□□ -1.48
RFC1-216ENST00000514572 SUPT20HQ8NEM7 779 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 UCMAQ8WVF2 138 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 SOCS4Q8WXH5 440 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 TMEM125Q96AQ2 219 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 RNF125Q96EQ8 232 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 RSRC1Q96IZ7 334 aaKnown RBP5.78□□□□□ -1.48
RFC1-216ENST00000514572 BARD1Q99728 777 aaKnown RBP5.78□□□□□ -1.48
RFC1-216ENST00000514572 HERC2P3Q9BVR0 1158 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 PHF7Q9BWX1 381 aaPredicted RBP5.78□□□□□ -1.48
RFC1-216ENST00000514572 ARHGAP39Q9C0H5 1083 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 SMYD2Q9NRG4 433 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 IRAK4Q9NWZ3 460 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 STEAP1Q9UHE8 339 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 ASAP1Q9ULH1 1129 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 HSF4Q9ULV5 492 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 ARHGAP26Q9UNA1 814 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 RCE1Q9Y256 329 aa5.78□□□□□ -1.48
RFC1-216ENST00000514572 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 MBD3L5A6NJ08 208 aaPredicted RBP5.77□□□□□ -1.49
RFC1-216ENST00000514572 A8MVJ9 347 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 M0QYT0 321 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 GFPT2O94808 682 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 RPS6KB1P23443 525 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 ABCD3P28288 659 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 VAV2P52735 878 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 GALNT2Q10471 571 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 ERV3-1Q14264 604 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 MEA1Q16626 185 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 TSTQ16762 297 aaKnown RBP5.77□□□□□ -1.49
RFC1-216ENST00000514572 AAK1Q2M2I8 961 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 PREPLQ4J6C6 727 aaPredicted RBP5.77□□□□□ -1.49
RFC1-216ENST00000514572 GRHL2Q6ISB3 625 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 CCDC144NLQ6NUI1 221 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 DTX2Q86UW9 622 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 GSPT2Q8IYD1 628 aaKnown RBP5.77□□□□□ -1.49
RFC1-216ENST00000514572 PDILTQ8N807 584 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 C11orf44Q8N8P7 122 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 SYT8Q8NBV8 401 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 NGDNQ8NEJ9 315 aaKnown RBP5.77□□□□□ -1.49
RFC1-216ENST00000514572 ATRIPQ8WXE1 791 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 NPIPB3Q92617 1050 aa5.77□□□□□ -1.49
RFC1-216ENST00000514572 FUZQ9BT04 418 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms