RNA–Protein interactions for RNA: ENST00000513440.5

CLOCK-211, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 3,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-211ENST00000513440 KCNT2Q6UVM3 1135 aa14.58□□□□□ -0.07
CLOCK-211ENST00000513440 CAND1Q86VP6 1230 aaKnown RBP14.58□□□□□ -0.07
CLOCK-211ENST00000513440 RAB3IPQ96QF0 476 aaPredicted RBP14.58□□□□□ -0.07
CLOCK-211ENST00000513440 LGMNQ99538 433 aa14.58□□□□□ -0.07
CLOCK-211ENST00000513440 TMEM120AQ9BXJ8 343 aa14.58□□□□□ -0.07
CLOCK-211ENST00000513440 NRDE2Q9H7Z3 1164 aa14.58□□□□□ -0.07
CLOCK-211ENST00000513440 KANSL3Q9P2N6 904 aa14.58□□□□□ -0.07
CLOCK-211ENST00000513440 CLEC11AQ9Y240 323 aa14.58□□□□□ -0.07
CLOCK-211ENST00000513440 MRPL42Q9Y6G3 142 aaKnown RBP14.58□□□□□ -0.07
CLOCK-211ENST00000513440 PDHXO00330 501 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 CLDN5O00501 218 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 RECQL4O94761 1208 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 CSH1P0DML2 217 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 CSH2P0DML3 217 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 CCNB1P14635 433 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 GOT1P17174 413 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 PITX1P78337 314 aaPredicted RBP14.58□□□□□ -0.08
CLOCK-211ENST00000513440 MAMDC4Q6UXC1 1216 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 PPTC7Q8NI37 304 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 SLC2A14Q8TDB8 520 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 KHSRPQ92945 711 aaKnown RBP eCLIP14.58□□□□□ -0.081e-6■■■□□ 16.4
CLOCK-211ENST00000513440 APOPT1Q96IL0 206 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 DHRS4Q9BTZ2 278 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 RNF39Q9H2S5 420 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 AP4E1Q9UPM8 1137 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 PIN4Q9Y237 131 aaKnown RBP14.58□□□□□ -0.08
CLOCK-211ENST00000513440 C2CD2Q9Y426 696 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 TTLL3Q9Y4R7 772 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 CREB3O43889 395 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 ENTPD5O75356 428 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 GMPRP36959 345 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 TMPRSS15P98073 1019 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 CES3Q6UWW8 571 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 VPS52Q8N1B4 723 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 NCAPGQ9BPX3 1015 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 MAF1Q9H063 256 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 ARL8BQ9NVJ2 186 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 KCNH4Q9UQ05 1017 aa14.58□□□□□ -0.08
CLOCK-211ENST00000513440 DESP17661 470 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 SERPINB4P48594 390 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 NME3Q13232 169 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 ACAP1Q15027 740 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 FAM187BQ17R55 369 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 TRIM68Q6AZZ1 485 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 UNC5AQ6ZN44 842 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 SLC26A11Q86WA9 606 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 CCNYQ8ND76 341 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 ADAM32Q8TC27 787 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 TBCBQ99426 244 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 POPDC2Q9HBU9 364 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 NOP53Q9NZM5 478 aaKnown RBP14.57□□□□□ -0.08
CLOCK-211ENST00000513440 CHADO15335 359 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 SNAI1O95863 264 aaPredicted RBP14.57□□□□□ -0.08
CLOCK-211ENST00000513440 ELF1P32519 619 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 SNAPC2Q13487 334 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 OLIG2Q13516 323 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 C9orf131Q5VYM1 1079 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 CLNKQ7Z7G1 428 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 ALYREFQ86V81 257 aaKnown RBP14.57□□□□□ -0.08
CLOCK-211ENST00000513440 NME8Q8N427 588 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 FAM13CQ8NE31 585 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 ATXN7L3BQ96GX2 97 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 TM9SF1O15321 606 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 ADCY6O43306 1168 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 HAUS5O94927 633 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 MYL2P10916 166 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 IGFBP6P24592 240 aaPredicted RBP14.57□□□□□ -0.08
CLOCK-211ENST00000513440 HOXA11P31270 313 aaPredicted RBP14.57□□□□□ -0.08
CLOCK-211ENST00000513440 AP1B1Q10567 949 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 RCN2Q14257 317 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 PDK2Q15119 407 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 RFWD3Q6PCD5 774 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 CTU1Q7Z7A3 348 aaKnown RBP14.57□□□□□ -0.08
CLOCK-211ENST00000513440 DEPDC1BQ8WUY9 529 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 SLC35F5Q8WV83 523 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 SLC7A6OSQ96CW6 309 aaPredicted RBP14.57□□□□□ -0.08
CLOCK-211ENST00000513440 KCTD15Q96SI1 283 aaPredicted RBP14.57□□□□□ -0.08
CLOCK-211ENST00000513440 NFKBIZQ9BYH8 718 aa14.57□□□□□ -0.08
CLOCK-211ENST00000513440 SPTLC1O15269 473 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 ENDOD1O94919 500 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 GNL1P36915 607 aaPredicted RBP14.56□□□□□ -0.08
CLOCK-211ENST00000513440 ANKRD20A3Q5VUR7 823 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 C16orf46Q6P387 395 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 ZNF276Q8N554 614 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 BEST2Q8NFU1 509 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 DNAJB3Q8WWF6 145 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 L3MBTL3Q96JM7 780 aaPredicted RBP14.56□□□□□ -0.08
CLOCK-211ENST00000513440 SNX25Q9H3E2 840 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 WDR27A2RRH5 827 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 KRT37O76014 449 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 GRM5P41594 1212 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 RIPK1Q13546 671 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 CHI3L2Q15782 390 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 DCAF6Q58WW2 860 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 TTC39BQ5VTQ0 682 aaPredicted RBP14.56□□□□□ -0.08
CLOCK-211ENST00000513440 HEATR6Q6AI08 1181 aaKnown RBP14.56□□□□□ -0.08
CLOCK-211ENST00000513440 TP53INP2Q8IXH6 220 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 NDUFAF2Q8N183 169 aa14.56□□□□□ -0.08
CLOCK-211ENST00000513440 MYCBPQ99417 103 aaPredicted RBP14.56□□□□□ -0.08
CLOCK-211ENST00000513440 FAM167BQ9BTA0 163 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms