RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TM4SF5O14894 197 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 HMBSP08397 361 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 P2RY2P41231 377 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 PSEN1P49768 467 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 SLC8A3P57103 927 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 ZCWPW2Q504Y3 356 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 DCAF17Q5H9S7 520 aaPredicted RBP16.19■□□□□ 0.18
TPM3-219ENST00000509409 N4BP2L1Q5TBK1 243 aaPredicted RBP16.19■□□□□ 0.18
TPM3-219ENST00000509409 ARMCX6Q7L4S7 300 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 TMEFF1Q8IYR6 380 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 FRMD1Q8N878 549 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 OLIG1Q8TAK6 271 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 TATDN2Q93075 761 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 BHMTQ93088 406 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 CDK5RAP1Q96SZ6 601 aaKnown RBP16.19■□□□□ 0.18
TPM3-219ENST00000509409 LSM14BQ9BX40 385 aaKnown RBP16.19■□□□□ 0.18
TPM3-219ENST00000509409 RASAL2Q9UJF2 1139 aa16.19■□□□□ 0.18
TPM3-219ENST00000509409 HELZP42694 1942 aaKnown RBP16.18■□□□□ 0.18
TPM3-219ENST00000509409 GREM1O60565 184 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 SMC2O95347 1197 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 HOXB2P14652 356 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 NTSR1P30989 418 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 PRCPP42785 496 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 EFEMP1Q12805 493 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 DAB2IPQ5VWQ8 1189 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 KLHDC10Q6PID8 442 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 CCDC186Q7Z3E2 898 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 SCD5Q86SK9 330 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 CHPFQ8IZ52 775 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 SLC4A11Q8NBS3 891 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 ERLEC1Q96DZ1 483 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 FAXDC2Q96IV6 333 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 PLK2Q9NYY3 685 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 ZNF510Q9Y2H8 683 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 GTF3C3Q9Y5Q9 886 aa16.18■□□□□ 0.18
TPM3-219ENST00000509409 PATE3B3GLJ2 98 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 KCNK5O95279 499 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 CHRM1P11229 460 aaPredicted RBP16.17■□□□□ 0.18
TPM3-219ENST00000509409 DGKGP49619 791 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 RAD23BP54727 409 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 COG7P83436 770 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 MAP7D1Q3KQU3 841 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 ZNF658Q5TYW1 1059 aaPredicted RBP16.17■□□□□ 0.18
TPM3-219ENST00000509409 EGFLAMQ63HQ2 1017 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 RSRC2Q7L4I2 434 aaKnown RBP16.17■□□□□ 0.18
TPM3-219ENST00000509409 ARHGAP18Q8N392 663 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 UBXN6Q9BZV1 441 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 TMEM9BQ9NQ34 198 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 CLIC5Q9NZA1 410 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 MBD1Q9UIS9 605 aaPredicted RBP16.17■□□□□ 0.18
TPM3-219ENST00000509409 STARD13Q9Y3M8 1113 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 USP3Q9Y6I4 520 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 MYOFQ9NZM1 2061 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 SPAG17Q6Q759 2223 aa16.17■□□□□ 0.18
TPM3-219ENST00000509409 LNP1A1A4G5 178 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 CACNG3O60359 315 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 STC2O76061 302 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 IRX4P78413 519 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 FKBP3Q00688 224 aaKnown RBP16.16■□□□□ 0.18
TPM3-219ENST00000509409 BECN1Q14457 450 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 UAP1L1Q3KQV9 507 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 ANKRD40Q6AI12 368 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 TOGARAM2Q6ZUX3 1019 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 FMR1NBQ8N0W7 255 aaPredicted RBP16.16■□□□□ 0.18
TPM3-219ENST00000509409 ZNF276Q8N554 614 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 DEFB119Q8N690 84 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 ANKRD52Q8NB46 1076 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 SMARCE1Q969G3 411 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 GSDMAQ96QA5 445 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 ACOX2Q99424 681 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 ARID3AQ99856 593 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 NUSAP1Q9BXS6 441 aaKnown RBP16.16■□□□□ 0.18
TPM3-219ENST00000509409 DCLK3Q9C098 648 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 MARK1Q9P0L2 795 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 HOOK1Q9UJC3 728 aaKnown RBP16.16■□□□□ 0.18
TPM3-219ENST00000509409 STRIP2Q9ULQ0 834 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 ABCA7Q8IZY2 2146 aa16.16■□□□□ 0.18
TPM3-219ENST00000509409 SLC12A8A0AV02 714 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 PRRT4C9JH25 899 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 SLC16A3O15427 465 aaKnown RBP16.15■□□□□ 0.18
TPM3-219ENST00000509409 AP5Z1O43299 807 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 CISD3P0C7P0 127 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 CD19P15391 556 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 GABRG2P18507 467 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 CORO1AP31146 461 aaKnown RBP16.15■□□□□ 0.18
TPM3-219ENST00000509409 CHKAP35790 457 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 PTGER3P43115 390 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 TKTL1P51854 596 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 MCCD1P59942 119 aaPredicted RBP16.15■□□□□ 0.18
TPM3-219ENST00000509409 YWHAEP62258 255 aaKnown RBP16.15■□□□□ 0.18
TPM3-219ENST00000509409 RPL6Q02878 288 aaKnown RBP16.15■□□□□ 0.18
TPM3-219ENST00000509409 CBWD6Q4V339 395 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 TRIM61Q5EBN2 209 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 CBWD3Q5JTY5 395 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 CBWD5Q5RIA9 395 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 LYSMD4Q5XG99 296 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 ARHGAP17Q68EM7 881 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 PSAPL1Q6NUJ1 521 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 SLC36A4Q6YBV0 504 aa16.15■□□□□ 0.18
TPM3-219ENST00000509409 Q6ZNB5 142 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms