RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 SMAD1Q15797 465 aaKnown RBP15.48■□□□□ 0.07
PHF3-209ENST00000509330 EXOC3L1Q86VI1 746 aa15.48■□□□□ 0.07
PHF3-209ENST00000509330 TP53INP2Q8IXH6 220 aa15.48■□□□□ 0.07
PHF3-209ENST00000509330 SRRM1Q8IYB3 904 aaKnown RBP15.48■□□□□ 0.07
PHF3-209ENST00000509330 PGM2Q96G03 612 aa15.48■□□□□ 0.07
PHF3-209ENST00000509330 RTP3Q9BQQ7 232 aa15.48■□□□□ 0.07
PHF3-209ENST00000509330 NRDE2Q9H7Z3 1164 aa15.48■□□□□ 0.07
PHF3-209ENST00000509330 STARD7Q9NQZ5 370 aa15.48■□□□□ 0.07
PHF3-209ENST00000509330 PIGVQ9NUD9 493 aa15.48■□□□□ 0.07
PHF3-209ENST00000509330 CHMP2BQ9UQN3 213 aa15.48■□□□□ 0.07
PHF3-209ENST00000509330 EFR3BQ9Y2G0 817 aa15.48■□□□□ 0.07
PHF3-209ENST00000509330 MORF4L2Q15014 288 aa15.47■□□□□ 0.07
PHF3-209ENST00000509330 EFHC1Q5JVL4 640 aa15.47■□□□□ 0.07
PHF3-209ENST00000509330 OTUD1Q5VV17 481 aaPredicted RBP15.47■□□□□ 0.07
PHF3-209ENST00000509330 RTN4RL1Q86UN2 441 aaPredicted RBP15.47■□□□□ 0.07
PHF3-209ENST00000509330 OR10T2Q8NGX3 314 aa15.47■□□□□ 0.07
PHF3-209ENST00000509330 FAF2Q96CS3 445 aa15.47■□□□□ 0.07
PHF3-209ENST00000509330 CSPG4P5Q96PW8 444 aa15.47■□□□□ 0.07
PHF3-209ENST00000509330 PIH1D1Q9NWS0 290 aaKnown RBP15.47■□□□□ 0.07
PHF3-209ENST00000509330 NUDT5Q9UKK9 219 aa15.47■□□□□ 0.07
PHF3-209ENST00000509330 PTPN9P43378 593 aa15.47■□□□□ 0.07
PHF3-209ENST00000509330 PDK2Q15119 407 aa15.47■□□□□ 0.07
PHF3-209ENST00000509330 CENPUQ71F23 418 aa15.47■□□□□ 0.07
PHF3-209ENST00000509330 LRRTM3Q86VH5 581 aa15.47■□□□□ 0.07
PHF3-209ENST00000509330 PPIL6Q8IXY8 311 aa15.47■□□□□ 0.07
PHF3-209ENST00000509330 KIF9Q9HAQ2 790 aa15.47■□□□□ 0.07
PHF3-209ENST00000509330 HCSTQ9UBK5 93 aa15.47■□□□□ 0.07
PHF3-209ENST00000509330 LHX1P48742 406 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 DEUP1Q05D60 604 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 PTK7Q13308 1070 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 TRIM71Q2Q1W2 868 aaKnown RBP15.46■□□□□ 0.07
PHF3-209ENST00000509330 SDHAF4Q5VUM1 108 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 ECHDC2Q86YB7 292 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 FBXO36Q8NEA4 188 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 SCAMP5Q8TAC9 235 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 B3GALT6Q96L58 329 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 LGMNQ99538 433 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 WDR83Q9BRX9 315 aaKnown RBP15.46■□□□□ 0.07
PHF3-209ENST00000509330 C11orf84Q9BUA3 381 aaPredicted RBP15.46■□□□□ 0.07
PHF3-209ENST00000509330 ANLNQ9NQW6 1124 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 SEPT10Q9P0V9 454 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 FARP1Q9Y4F1 1045 aaPredicted RBP15.46■□□□□ 0.07
PHF3-209ENST00000509330 A0A1W2PQ45 241 aaPredicted RBP15.46■□□□□ 0.07
PHF3-209ENST00000509330 A0A1W2PQY0 241 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 MDM4O15151 490 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 ODC1P11926 461 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 OR1G1P47890 313 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 SLC25A52Q3SY17 297 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 NAT8LQ8N9F0 302 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 PRMT1Q99873 361 aaKnown RBP15.46■□□□□ 0.07
PHF3-209ENST00000509330 TRIM56Q9BRZ2 755 aaKnown RBP15.46■□□□□ 0.07
PHF3-209ENST00000509330 FAM129AQ9BZQ8 928 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 DNAI2Q9GZS0 605 aa15.46■□□□□ 0.07
PHF3-209ENST00000509330 FAM72CH0Y354 149 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 DDHD2O94830 711 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 AGTP01019 485 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 FYNP06241 537 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 APRTP07741 180 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 GATMP50440 423 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 DSC3Q14574 896 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 FAM72AQ5TYM5 149 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 FAM72DQ6L9T8 149 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 NLRP14Q86W24 1093 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 FAM72BQ86X60 149 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.45■□□□□ 0.06
PHF3-209ENST00000509330 GDAP1Q8TB36 358 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 MYCBPAPQ8TBZ2 947 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 PYROXD1Q8WU10 500 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 TSPYL1Q9H0U9 437 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 DNAJB4Q9UDY4 337 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 PBX3P40426 434 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 RNASELQ05823 741 aaKnown RBP15.45■□□□□ 0.06
PHF3-209ENST00000509330 QPCTQ16769 361 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 KCNT2Q6UVM3 1135 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 CD300LGQ6UXG3 332 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 MRPL10Q7Z7H8 261 aaKnown RBP15.45■□□□□ 0.06
PHF3-209ENST00000509330 TEKT4Q8WW24 435 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 CCT8L2Q96SF2 557 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 ZNF670Q9BS34 389 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 EPN3Q9H201 632 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 USP29Q9HBJ7 922 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 DDIT4Q9NX09 232 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 SHOC2Q9UQ13 582 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 SPAG7O75391 227 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 TUSC3Q13454 348 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 DPYSL2Q16555 572 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 OVOS1Q6IE37 1185 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 CEP57Q86XR8 500 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 IGDCC3Q8IVU1 814 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 LINC01599Q8WXQ3 324 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 CENPIQ92674 756 aaPredicted RBP15.45■□□□□ 0.06
PHF3-209ENST00000509330 HHIPL1Q96JK4 782 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 PGLYRP2Q96PD5 576 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 POPDC2Q9HBU9 364 aa15.45■□□□□ 0.06
PHF3-209ENST00000509330 INTS9Q9NV88 658 aaKnown RBP15.45■□□□□ 0.06
PHF3-209ENST00000509330 I6L893 689 aaPredicted RBP15.44■□□□□ 0.06
PHF3-209ENST00000509330 MFSD11O43934 449 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 TOMM70O94826 608 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 IVLP07476 585 aa15.44■□□□□ 0.06
PHF3-209ENST00000509330 CST5P28325 142 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms