RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 PTPN20Q4JDL3 420 aa21.11■□□□□ 0.97
HOXC6-204ENST00000509328 MSANTD2Q6P1R3 559 aa21.11■□□□□ 0.97
HOXC6-204ENST00000509328 TRIM72Q6ZMU5 477 aa21.11■□□□□ 0.97
HOXC6-204ENST00000509328 BEND5Q7L4P6 421 aa21.11■□□□□ 0.97
HOXC6-204ENST00000509328 CPA6Q8N4T0 437 aa21.11■□□□□ 0.97
HOXC6-204ENST00000509328 FBXL6Q8N531 539 aa21.11■□□□□ 0.97
HOXC6-204ENST00000509328 FLCNQ8NFG4 579 aa21.11■□□□□ 0.97
HOXC6-204ENST00000509328 FAM149B1Q96BN6 582 aa21.11■□□□□ 0.97
HOXC6-204ENST00000509328 DDX23Q9BUQ8 820 aaKnown RBP21.11■□□□□ 0.97
HOXC6-204ENST00000509328 LINC00597Q9H2U6 94 aa21.11■□□□□ 0.97
HOXC6-204ENST00000509328 LSM7Q9UK45 103 aaKnown RBP21.11■□□□□ 0.97
HOXC6-204ENST00000509328 MYOFQ9NZM1 2061 aa21.11■□□□□ 0.97
HOXC6-204ENST00000509328 KMT2EQ8IZD2 1858 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 A0A1W2PQJ5 194 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 STK25O00506 426 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 MAN2B1O00754 1011 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 NFATC1O95644 943 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 ERBB2P04626 1255 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 CYP1A1P04798 512 aaPredicted RBP21.1■□□□□ 0.97
HOXC6-204ENST00000509328 NOMO3P69849 1222 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 SFMBT2Q5VUG0 894 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 C1orf228Q6PIY5 440 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 ZNF852Q6ZMS4 543 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 HTR3DQ70Z44 454 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 IRF2BP2Q7Z5L9 587 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 ERICH1Q86X53 443 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 ZDHHC17Q8IUH5 632 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 SUGP1Q8IWZ8 645 aaKnown RBP21.1■□□□□ 0.97
HOXC6-204ENST00000509328 MSANTD4Q8NCY6 345 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 TTC8Q8TAM2 541 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 OTUB2Q96DC9 234 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 ECT2Q9H8V3 914 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 ASNSD1Q9NWL6 643 aa21.1■□□□□ 0.97
HOXC6-204ENST00000509328 ITIH6Q6UXX5 1313 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 KANSL1LA0AUZ9 987 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 SLC12A8A0AV02 714 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 GREM1O60565 184 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 STC2O76061 302 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 FYNP06241 537 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 GLI1P08151 1106 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 NCAM1P13591 858 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 GABRB2P47870 512 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 YWHAZP63104 245 aaKnown RBP21.09■□□□□ 0.97
HOXC6-204ENST00000509328 NR1H3Q13133 447 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 ASIC2Q16515 512 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 EFHC1Q5JVL4 640 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 NAA35Q5VZE5 725 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 OR6B2Q6IFH4 312 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 TOGARAM2Q6ZUX3 1019 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 FAM183BPQ6ZVS7 135 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 RALGPS2Q86X27 583 aaPredicted RBP21.09■□□□□ 0.97
HOXC6-204ENST00000509328 CPA5Q8WXQ8 436 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 WBP2Q969T9 261 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 C18orf8Q96DM3 657 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 AGPAT1Q99943 283 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 POPDC2Q9HBU9 364 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 AIPL1Q9NZN9 384 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 SFMBT1Q9UHJ3 866 aa21.09■□□□□ 0.97
HOXC6-204ENST00000509328 MRPS17Q9Y2R5 130 aaKnown RBP21.09■□□□□ 0.97
HOXC6-204ENST00000509328 HBS1LQ9Y450 684 aaKnown RBP21.09■□□□□ 0.97
HOXC6-204ENST00000509328 F5P12259 2224 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 OTOL1A6NHN0 477 aaPredicted RBP21.08■□□□□ 0.97
HOXC6-204ENST00000509328 SPECC1L-ADORA2AF8WAN1 911 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 SCAMP3O14828 347 aaKnown RBP21.08■□□□□ 0.97
HOXC6-204ENST00000509328 CTHP32929 405 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 SOX9P48436 509 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 CLCN5P51795 746 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 AMPD2Q01433 879 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 SLC6A3Q01959 620 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 CWF19L1Q69YN2 538 aaKnown RBP21.08■□□□□ 0.97
HOXC6-204ENST00000509328 ASTLQ6HA08 431 aaPredicted RBP21.08■□□□□ 0.97
HOXC6-204ENST00000509328 OLFML1Q6UWY5 402 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 BBS7Q8IWZ6 715 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 ADGRG2Q8IZP9 1017 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 ZNF397Q8NF99 534 aaPredicted RBP21.08■□□□□ 0.97
HOXC6-204ENST00000509328 FAM3CQ92520 227 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 PLD4Q96BZ4 506 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 PIWIL1Q96J94 861 aaKnown RBP21.08■□□□□ 0.97
HOXC6-204ENST00000509328 NELL2Q99435 816 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 DCLK3Q9C098 648 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 NUCKS1Q9H1E3 243 aaKnown RBP21.08■□□□□ 0.97
HOXC6-204ENST00000509328 CAPN11Q9UMQ6 739 aa21.08■□□□□ 0.97
HOXC6-204ENST00000509328 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.08■□□□□ 0.973e-6■■□□□ 13.7
HOXC6-204ENST00000509328 SHISA7A6NL88 538 aa21.07■□□□□ 0.96
HOXC6-204ENST00000509328 CAPN9O14815 690 aa21.07■□□□□ 0.96
HOXC6-204ENST00000509328 HSF2BPO75031 334 aa21.07■□□□□ 0.96
HOXC6-204ENST00000509328 HMBSP08397 361 aa21.07■□□□□ 0.96
HOXC6-204ENST00000509328 AOC1P19801 751 aa21.07■□□□□ 0.96
HOXC6-204ENST00000509328 CD72P21854 359 aa21.07■□□□□ 0.96
HOXC6-204ENST00000509328 Q6ZNB5 142 aa21.07■□□□□ 0.96
HOXC6-204ENST00000509328 PCDHB18PQ96TA0 734 aa21.07■□□□□ 0.96
HOXC6-204ENST00000509328 ANP32EQ9BTT0 268 aa21.07■□□□□ 0.96
HOXC6-204ENST00000509328 RBSNQ9H1K0 784 aa21.07■□□□□ 0.96
HOXC6-204ENST00000509328 LTB4R2Q9NPC1 389 aa21.07■□□□□ 0.96
HOXC6-204ENST00000509328 SEPT11Q9NVA2 429 aaKnown RBP21.07■□□□□ 0.96
HOXC6-204ENST00000509328 NAALADL1Q9UQQ1 740 aa21.07■□□□□ 0.96
HOXC6-204ENST00000509328 ZNF510Q9Y2H8 683 aa21.07■□□□□ 0.96
HOXC6-204ENST00000509328 UNGP13051 313 aaPredicted RBP21.06■□□□□ 0.96
HOXC6-204ENST00000509328 GJA4P35212 333 aa21.06■□□□□ 0.96
HOXC6-204ENST00000509328 SCNN1AP37088 669 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms