RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 LPIN1Q14693 890 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 TAF5Q15542 800 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 TPSAB1Q15661 275 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 LONRF1Q17RB8 773 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 TRIM71Q2Q1W2 868 aaKnown RBP9.6□□□□□ -0.87
HTT-205ENST00000509043 ARL13BQ3SXY8 428 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 SLC45A4Q5BKX6 768 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 MDH1BQ5I0G3 518 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 EFHC2Q5JST6 749 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 GKAP1Q5VSY0 366 aaPredicted RBP9.6□□□□□ -0.87
HTT-205ENST00000509043 DCLRE1AQ6PJP8 1040 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 AGMOQ6ZNB7 445 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 FAM35AQ86V20 835 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 ZBED8Q8IZ13 594 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 DEFB106AQ8N104 65 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 THEM5Q8N1Q8 247 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 ATXN2LQ8WWM7 1075 aaKnown RBP9.6□□□□□ -0.87
HTT-205ENST00000509043 APBB2Q92870 758 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 FAM149B1Q96BN6 582 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 ALKBH8Q96BT7 664 aaKnown RBP9.6□□□□□ -0.87
HTT-205ENST00000509043 SGSM3Q96HU1 749 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 C9orf72Q96LT7 481 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 GLT1D1Q96MS3 346 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 QKIQ96PU8 341 aaKnown RBP eCLIP9.6□□□□□ -0.87
HTT-205ENST00000509043 CSPG4P5Q96PW8 444 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 SELENOSQ9BQE4 189 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 PLCD4Q9BRC7 762 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 B3GNT5Q9BYG0 378 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 ARHGAP39Q9C0H5 1083 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 DHX35Q9H5Z1 703 aaKnown RBP9.6□□□□□ -0.87
HTT-205ENST00000509043 ACSS3Q9H6R3 686 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 USP29Q9HBJ7 922 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 LRRC4CQ9HCJ2 640 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 CSNK1G1Q9HCP0 422 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 PPANQ9NQ55 473 aaKnown RBP9.6□□□□□ -0.87
HTT-205ENST00000509043 NKIRAS1Q9NYS0 192 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 KANSL3Q9P2N6 904 aa9.6□□□□□ -0.87
HTT-205ENST00000509043 PSMC3IPQ9P2W1 217 aaPredicted RBP9.6□□□□□ -0.87
HTT-205ENST00000509043 DDX20Q9UHI6 824 aaKnown RBP9.6□□□□□ -0.87
HTT-205ENST00000509043 XPO7Q9UIA9 1087 aaKnown RBP9.6□□□□□ -0.87
HTT-205ENST00000509043 UTRNP46939 3433 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 TRIP11Q15643 1979 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 SMIM23A6NLE4 172 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 TMEM189-UBE2V1I3L0A0 370 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 PIK3R2O00459 728 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 TRDMT1O14717 391 aaKnown RBP9.59□□□□□ -0.87
HTT-205ENST00000509043 PRPF4O43172 522 aaKnown RBP eCLIP9.59□□□□□ -0.87
HTT-205ENST00000509043 MTSS1O43312 755 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 AP1G2O75843 785 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 KIAA0754O94854 1291 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 MLNP12872 115 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 ETS1P14921 441 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 CD52P31358 61 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 CYP2C18P33260 490 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 HTR7P34969 479 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 FDFT1P37268 417 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 SLCO1A2P46721 670 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 SULT1E1P49888 294 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 SCNN1GP51170 649 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 CLCNKBP51801 687 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 TKTL1P51854 596 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 ACLYP53396 1101 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 DAOAP59103 153 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 BASP1P80723 227 aaKnown RBP9.59□□□□□ -0.87
HTT-205ENST00000509043 DEUP1Q05D60 604 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 MMRN1Q13201 1228 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 PDK1Q15118 436 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 DCAF6Q58WW2 860 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 PPP6R3Q5H9R7 873 aaPredicted RBP9.59□□□□□ -0.87
HTT-205ENST00000509043 INTS6LQ5JSJ4 861 aaKnown RBP9.59□□□□□ -0.87
HTT-205ENST00000509043 ZNF618Q5T7W0 954 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 TTC19Q6DKK2 380 aaPredicted RBP9.59□□□□□ -0.87
HTT-205ENST00000509043 CYP4F22Q6NT55 531 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 FAM171BQ6P995 826 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 C1orf228Q6PIY5 440 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 PAQR9Q6ZVX9 377 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 CPLX4Q7Z7G2 160 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 SRLQ86TD4 932 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 ZNF598Q86UK7 904 aaKnown RBP9.59□□□□□ -0.87
HTT-205ENST00000509043 ZC3H18Q86VM9 953 aaKnown RBP9.59□□□□□ -0.87
HTT-205ENST00000509043 PALM2Q8IXS6 379 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 CCDC13Q8IYE1 715 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 VPS52Q8N1B4 723 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 UHMK1Q8TAS1 419 aaKnown RBP9.59□□□□□ -0.87
HTT-205ENST00000509043 PPP1R13LQ8WUF5 828 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 MAML1Q92585 1016 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 CYTH2Q99418 400 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 FTHL17Q9BXU8 183 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 AGO3Q9H9G7 860 aaKnown RBP9.59□□□□□ -0.87
HTT-205ENST00000509043 VPS37BQ9H9H4 285 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 XAB2Q9HCS7 855 aaKnown RBP9.59□□□□□ -0.87
HTT-205ENST00000509043 CRTAC1Q9NQ79 661 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 RGS18Q9NS28 235 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 KRT82Q9NSB4 513 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 MTMR10Q9NXD2 777 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 SAE1Q9UBE0 346 aaPredicted RBP9.59□□□□□ -0.87
HTT-205ENST00000509043 NAALADL1Q9UQQ1 740 aa9.59□□□□□ -0.87
HTT-205ENST00000509043 CAPN9O14815 690 aa9.58□□□□□ -0.88
HTT-205ENST00000509043 PPP1R12AO14974 1030 aaPredicted RBP9.58□□□□□ -0.88
HTT-205ENST00000509043 KCNN4O15554 427 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms