RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 LCE2AQ5TA79 106 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 RNF220Q5VTB9 566 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ARHGEF16Q5VV41 709 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 FKBP1CQ5VVH2 108 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 PLA2G4FQ68DD2 849 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 SLC39A4Q6P5W5 647 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 DARS2Q6PI48 645 aaKnown RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 SLC30A10Q6XR72 485 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 TIFABQ6ZNK6 161 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 DHDDSQ86SQ9 333 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 PRPF39Q86UA1 669 aaKnown RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 PDSS2Q86YH6 399 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 TMEM126BQ8IUX1 230 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 CCNJLQ8IV13 435 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 WDR49Q8IV35 697 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 NLGN1Q8N2Q7 840 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 CCDC33Q8N5R6 958 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 UBR7Q8N806 425 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ICA1LQ8NDH6 482 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 RBM15BQ8NDT2 890 aaKnown RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 MCUQ8NE86 351 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZSWIM2Q8NEG5 633 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 OR6Y1Q8NGX8 325 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 B4GALNT2Q8NHY0 566 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 FAM81AQ8TBF8 368 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 DTX3LQ8TDB6 740 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 SYTL5Q8TDW5 730 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 DDI1Q8WTU0 396 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 FAM172AQ8WUF8 416 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 UCMAQ8WVF2 138 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 NRG4Q8WWG1 115 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZNF606Q8WXB4 792 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 IRF7Q92985 503 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 AZIN2Q96A70 460 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 FAF2Q96CS3 445 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 NGLY1Q96IV0 654 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 AGBL1Q96MI9 1066 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ACAP3Q96P50 834 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 HAPLN3Q96S86 360 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 KCNK16Q96T55 309 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 SERPINI1Q99574 410 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 MSTO1Q9BUK6 570 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 NMUR2Q9GZQ4 415 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 KLC2Q9H0B6 622 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 POLR3FQ9H1D9 316 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 LHX5Q9H2C1 402 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 FAM124BQ9H5Z6 455 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZWILCHQ9H900 591 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 KCNK13Q9HB14 408 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 XAB2Q9HCS7 855 aaKnown RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 S100A14Q9HCY8 104 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 FBXO6Q9NRD1 293 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 KRT82Q9NSB4 513 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 HOMER2Q9NSB8 354 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 KLHL11Q9NVR0 708 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 PLK2Q9NYY3 685 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 SIRPGQ9P1W8 387 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ATXN10Q9UBB4 475 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 ITGA11Q9UKX5 1188 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 CHMP2BQ9UQN3 213 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 APOBEC2Q9Y235 224 aaKnown RBP5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 TEX264Q9Y6I9 313 aa5.15□□□□□ -1.59
HMGB3P16-201ENST00000508037 FAM237BA0A1B0GVD1 139 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 TCRBV9S1A1TA0A576 114 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ARHGAP10A1A4S6 786 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ARHGAP42A6NI28 874 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 C3orf70A6NLC5 250 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 FIGNL2A6NMB9 653 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 EIF4E1BA6NMX2 242 aaKnown RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 BTBD19C9JJ37 291 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 KBTBD13C9JR72 458 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 F8VP50 259 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 H3BM21 787 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 H7C0C1 242 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 GOLGA8RI6L899 631 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 K7ERI5 159 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 AP1G1O43747 822 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 FAM189A1O60320 539 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 GPR37L1O60883 481 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 LILRA1O75019 489 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 SNNO75324 88 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 H2AFYO75367 372 aaKnown RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 STK10O94804 968 aaKnown RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 TMCC1O94876 653 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 VNN1O95497 513 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 BAG2O95816 211 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ASS1P00966 412 aaKnown RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 UBTFL6P0CB48 400 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 SETSIPP0DME0 302 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 RBP3P10745 1247 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 FGFR1P11362 822 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 MYCLP12524 364 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 CCDC130P13994 396 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 UQCRBP14927 111 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 ZFXP17010 805 aaPredicted RBP5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 TGM2P21980 687 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 PRKCHP24723 683 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 MAGEA6P43360 314 aa5.14□□□□□ -1.59
HMGB3P16-201ENST00000508037 GABRB2P47870 512 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms