RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 SAPCD2Q86UD0 394 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 BRSK2Q8IWQ3 736 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 SMG8Q8ND04 991 aaKnown RBP6.24□□□□□ -1.41
SCLT1-207ENST00000506233 OR2W6PQ8NHA6 318 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 CHTF18Q8WVB6 975 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 CAPZA3Q96KX2 299 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 CCDC42Q96M95 316 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 CGRRF1Q99675 332 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 ELOVL4Q9GZR5 314 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 KMT5AQ9NQR1 393 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 GPRC5BQ9NZH0 403 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 SAMD15Q9P1V8 674 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 COQ6Q9Y2Z9 468 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 ALG6Q9Y672 507 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 FREM2Q5SZK8 3169 aa6.24□□□□□ -1.41
SCLT1-207ENST00000506233 A0A1B0GUA9 196 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 XPOTO43592 962 aaKnown RBP6.23□□□□□ -1.41
SCLT1-207ENST00000506233 THBS1P07996 1170 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 RHOXF2BP0C7M4 288 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 EPB41P11171 864 aaKnown RBP6.23□□□□□ -1.41
SCLT1-207ENST00000506233 ARF4P18085 180 aaPredicted RBP6.23□□□□□ -1.41
SCLT1-207ENST00000506233 ABCB4P21439 1286 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 MMP8P22894 467 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 STT3AP46977 705 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 SCNN1BP51168 640 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 KLHL30Q0D2K2 578 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 ATG14Q6ZNE5 492 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 TMEM102Q8N9M5 508 aaPredicted RBP6.23□□□□□ -1.41
SCLT1-207ENST00000506233 TRIM58Q8NG06 486 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 GOLGA1Q92805 767 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 DIO2Q92813 273 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 RTP3Q9BQQ7 232 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 RHOXF2Q9BQY4 288 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 EIF2AQ9BY44 585 aaKnown RBP6.23□□□□□ -1.41
SCLT1-207ENST00000506233 GPAMQ9HCL2 828 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 PICK1Q9NRD5 415 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 CACNA2D2Q9NY47 1150 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 MARK1Q9P0L2 795 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 CPP00450 1065 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 SHBGP04278 402 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 GZMAP12544 262 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 ATF7P17544 494 aaPredicted RBP6.23□□□□□ -1.41
SCLT1-207ENST00000506233 NFKB1P19838 968 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 CLCN3P51790 818 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 KRT83P78385 493 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 MLLT1Q03111 559 aaPredicted RBP6.23□□□□□ -1.41
SCLT1-207ENST00000506233 GAD2Q05329 585 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 INCA1Q0VD86 236 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 ALCAMQ13740 583 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 TAF5Q15542 800 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 ASIC2Q16515 512 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 SLC9C1Q4G0N8 1177 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 AGAP9Q5VTM2 703 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 CES4AQ5XG92 561 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 ZPBP2Q6X784 338 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 SPOCD1Q6ZMY3 1216 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 KRT77Q7Z794 578 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 PHF13Q86YI8 300 aaPredicted RBP6.23□□□□□ -1.41
SCLT1-207ENST00000506233 MZB1Q8WU39 189 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 C18orf8Q96DM3 657 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 C1orf159Q96HA4 380 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 ZNF668Q96K58 619 aaPredicted RBP6.23□□□□□ -1.41
SCLT1-207ENST00000506233 TEKT5Q96M29 485 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 CCDC138Q96M89 665 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 THG1LQ9NWX6 298 aaKnown RBP6.23□□□□□ -1.41
SCLT1-207ENST00000506233 TMOD4Q9NZQ9 345 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 SLC12A6Q9UHW9 1150 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 NOC2LQ9Y3T9 749 aaKnown RBP6.23□□□□□ -1.41
SCLT1-207ENST00000506233 FOXO6A8MYZ6 492 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 SHOXO15266 292 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 ATP8B1O43520 1251 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 HLA-DRAP01903 254 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 FTLP02792 175 aaPredicted RBP6.23□□□□□ -1.41
SCLT1-207ENST00000506233 CLTAP09496 248 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 LRRC32Q14392 662 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 CCDC40Q4G0X9 1142 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 KRT39Q6A163 491 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 ACAD10Q6JQN1 1059 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 SH2D5Q6ZV89 423 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 CD302Q8IX05 232 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 MTMR12Q9C0I1 747 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 CLEC4MQ9H2X3 399 aaPredicted RBP6.23□□□□□ -1.41
SCLT1-207ENST00000506233 RUBCNLQ9H714 662 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 VIPAS39Q9H9C1 493 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 NMRK2Q9NPI5 230 aa6.23□□□□□ -1.41
SCLT1-207ENST00000506233 A0A1W2PRQ8 180 aa6.22□□□□□ -1.41
SCLT1-207ENST00000506233 FSCN2O14926 492 aa6.22□□□□□ -1.41
SCLT1-207ENST00000506233 TLR5O60602 858 aa6.22□□□□□ -1.41
SCLT1-207ENST00000506233 COMTP21964 271 aa6.22□□□□□ -1.41
SCLT1-207ENST00000506233 HSPA9P38646 679 aaKnown RBP6.22□□□□□ -1.41
SCLT1-207ENST00000506233 PGFP49763 221 aa6.22□□□□□ -1.41
SCLT1-207ENST00000506233 STAT5BP51692 787 aa6.22□□□□□ -1.41
SCLT1-207ENST00000506233 CACNA2D1P54289 1103 aa6.22□□□□□ -1.41
SCLT1-207ENST00000506233 SCAND1P57086 179 aa6.22□□□□□ -1.41
SCLT1-207ENST00000506233 MYL6P60660 151 aa6.22□□□□□ -1.41
SCLT1-207ENST00000506233 KIAA1958Q8N8K9 716 aa6.22□□□□□ -1.41
SCLT1-207ENST00000506233 GPBAR1Q8TDU6 330 aa6.22□□□□□ -1.41
SCLT1-207ENST00000506233 RFFLQ8WZ73 363 aa6.22□□□□□ -1.41
SCLT1-207ENST00000506233 CPB2Q96IY4 423 aa6.22□□□□□ -1.41
SCLT1-207ENST00000506233 PWWP2AQ96N64 755 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms