RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 CD302Q8IX05 232 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 NUP93Q8N1F7 819 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 ANKRD35Q8N283 1001 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 PRR18Q8N4B5 295 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 TC2NQ8N9U0 490 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 PCYOX1LQ8NBM8 494 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 RAPGEF5Q92565 580 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CHFRQ96EP1 664 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 CCDC138Q96M89 665 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 NT5C1BQ96P26 610 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 KLF6Q99612 283 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 RIOK1Q9BRS2 568 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 RNF26Q9BY78 433 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 SLC13A1Q9BZW2 595 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 S100A14Q9HCY8 104 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 VCX3AQ9NNX9 186 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 NGRNQ9NPE2 291 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 PAQR5Q9NXK6 330 aaPredicted RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 PRKAG3Q9UGI9 489 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 LIMA1Q9UHB6 759 aaKnown RBP3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 LTBP3Q9NS15 1303 aa3.81□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM221AA4D161 298 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 GMNCA6NCL1 334 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 WDR64B1ANS9 1081 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 AP3B1O00203 1094 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ARIH2O95376 493 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 KRT1P04264 644 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 SHBGP04278 402 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 TRIM49P0CI25 452 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 TRIM49CP0CI26 452 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 T-ENOLP0DO92 83 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 PLS3P13797 630 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 VAV1P15498 845 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF16P17020 682 aaPredicted RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 PTPREP23469 700 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 PRDX5P30044 214 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ADD2P35612 726 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 CAP2P40123 477 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 MDH1P40925 334 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 HADHAP40939 763 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 PTPN9P43378 593 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ALDH7A1P49419 539 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 RAD23BP54727 409 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 AP2B1P63010 937 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 MAP3K10Q02779 954 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 SCARF1Q14162 830 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 GALEQ14376 348 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 CYP27C1Q4G0S4 372 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 IQCCQ4KMZ1 466 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 Q5BKY6 102 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 HGSNATQ68CP4 663 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 IL31Q6EBC2 164 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 C4orf22Q6V702 233 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 DNAAF5Q86Y56 855 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 GLYCTKQ8IVS8 523 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 RIBC1Q8N443 379 aaPredicted RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 VGLL2Q8N8G2 317 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 PYROXD1Q8WU10 500 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 C1orf54Q8WWF1 131 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 WFDC12Q8WWY7 111 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 CHMP6Q96FZ7 201 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ATXN7L3BQ96GX2 97 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 RUNDC3BQ96NL0 473 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 PSD2Q9BQI7 771 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 KCNN2Q9H2S1 579 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 NRBP2Q9NSY0 501 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 AGPAT5Q9NUQ2 364 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 KLHL9Q9P2J3 617 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 MARCOQ9UEW3 520 aaPredicted RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 VANGL2Q9ULK5 521 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 MTF2Q9Y483 593 aaPredicted RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 XDHP47989 1333 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 MROH5Q6ZUA9 1318 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 E2F8A0AVK6 867 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 SYNDIG1LA6NDD5 238 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ARHGEF15O94989 841 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 LYNP07948 512 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 PLA2G4BP0C869 781 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 VCLP18206 1134 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 PSMA4P25789 261 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 MCAMP43121 646 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 KCNJ1P48048 391 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 BCAP31P51572 246 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 CACNA2D1P54289 1103 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 GPR85P60893 370 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 BTKQ06187 659 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF33BQ06732 778 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 DLGAP5Q15398 846 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ARHGEF16Q5VV41 709 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 PRAMEF18Q5VWM3 479 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 DARS2Q6PI48 645 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 RAD9BQ6WBX8 426 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 SATL1Q86VE3 508 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 DEPDC4Q8N2C3 294 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 SLC17A8Q8NDX2 589 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 SHCBP1Q8NEM2 672 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 SPATA4Q8NEY3 305 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 MDM1Q8TC05 714 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 SMG7Q92540 1137 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms