RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 CDC23Q9UJX2 597 aa4.83□□□□□ -1.64
SUB1-204ENST00000504016 AFG3L2Q9Y4W6 797 aa4.83□□□□□ -1.64
SUB1-204ENST00000504016 CACNA1IQ9P0X4 2223 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 RASA4BC9J798 803 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 E5RJQ4 531 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 SOCS2O14508 198 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 RASA4O43374 803 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 SNX2O60749 519 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 PMPCBO75439 489 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 PRKCBP05771 671 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 CREB1P16220 341 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 TIRAPP58753 221 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 PSG6Q00889 435 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 RAP1GAP2Q684P5 730 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 XRRA1Q6P2D8 792 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 GGT6Q6P531 493 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 MRPL10Q7Z7H8 261 aaKnown RBP4.82□□□□□ -1.64
SUB1-204ENST00000504016 FSTL5Q8N475 847 aaPredicted RBP4.82□□□□□ -1.64
SUB1-204ENST00000504016 SIRT6Q8N6T7 355 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 WASF1Q92558 559 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 ELAC2Q9BQ52 826 aaKnown RBP4.82□□□□□ -1.64
SUB1-204ENST00000504016 THAP7Q9BT49 309 aaPredicted RBP4.82□□□□□ -1.64
SUB1-204ENST00000504016 VN1R3Q9BXE9 311 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 MAGEB5Q9BZ81 275 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 CIPCQ9C0C6 399 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.82□□□□□ -1.64
SUB1-204ENST00000504016 SLC25A32Q9H2D1 315 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 DNAJB11Q9UBS4 358 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 ASAP1Q9ULH1 1129 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 ZMYND8Q9ULU4 1186 aaPredicted RBP4.82□□□□□ -1.64
SUB1-204ENST00000504016 SLC27A6Q9Y2P4 619 aa4.82□□□□□ -1.64
SUB1-204ENST00000504016 CCDC194A0A1B0GVG4 234 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 A0A1W2PPC4 97 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 FAM234BA2RU67 622 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 H3BNC9 293 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 DSCR3O14972 297 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 CA12O43570 354 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 SPRY2O43597 315 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 FGBP02675 491 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 CBSLP0DN79 551 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 ATP5F1P24539 256 aaPredicted RBP4.81□□□□□ -1.64
SUB1-204ENST00000504016 GKP32189 559 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 CBSP35520 551 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 RENBPP51606 427 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 COPB1P53618 953 aaKnown RBP4.81□□□□□ -1.64
SUB1-204ENST00000504016 DEUP1Q05D60 604 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 SLC35G1Q2M3R5 365 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 KLHL22Q53GT1 634 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 ARHGAP15Q53QZ3 475 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 RUSC1-AS1Q66K80 236 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 BEND5Q7L4P6 421 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 C11orf96Q7Z7L8 435 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 DPP9Q86TI2 863 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 ACRBPQ8NEB7 543 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 C18orf8Q96DM3 657 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 SGCZQ96LD1 299 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 MPHOSPH6Q99547 160 aaKnown RBP4.81□□□□□ -1.64
SUB1-204ENST00000504016 PCDHAC1Q9H158 963 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 EBF3Q9H4W6 596 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 MGAT4CQ9UBM8 478 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 AMFRQ9UKV5 643 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 RIMKLBQ9ULI2 386 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 GABRQQ9UN88 632 aa4.81□□□□□ -1.64
SUB1-204ENST00000504016 SCAF8Q9UPN6 1271 aaKnown RBP4.81□□□□□ -1.64
SUB1-204ENST00000504016 FCHO1O14526 889 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 AREL1O15033 823 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 COQ9O75208 318 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 FGF18O76093 207 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 PECAM1P16284 738 aaPredicted RBP4.8□□□□□ -1.64
SUB1-204ENST00000504016 CCKBRP32239 447 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 TM4SF4P48230 202 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 HSPA7P48741 367 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 FHL3Q13643 280 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 RAPGEF1Q13905 1077 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 ZNF268Q14587 947 aaPredicted RBP4.8□□□□□ -1.64
SUB1-204ENST00000504016 RNASE12Q5GAN4 147 aaKnown RBP4.8□□□□□ -1.64
SUB1-204ENST00000504016 FAXCQ5TGI0 409 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 IZUMO3Q5VZ72 239 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 FBXO38Q6PIJ6 1188 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 SHC4Q6S5L8 630 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 CRELD2Q6UXH1 353 aaPredicted RBP4.8□□□□□ -1.64
SUB1-204ENST00000504016 MORC1Q86VD1 984 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 CCDC28AQ8IWP9 274 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 SAMD14Q8IZD0 417 aaPredicted RBP4.8□□□□□ -1.64
SUB1-204ENST00000504016 NRACQ8N912 160 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 GLIS1Q8NBF1 620 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 VPS37AQ8NEZ2 397 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 PIGOQ8TEQ8 1089 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 WDYHV1Q96HA8 205 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 FAM83DQ9H4H8 585 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 NLRC4Q9NPP4 1024 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 SLC52A1Q9NWF4 448 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 CAPN11Q9UMQ6 739 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 DAAM1Q9Y4D1 1078 aa4.8□□□□□ -1.64
SUB1-204ENST00000504016 PODXLO00592 558 aa4.79□□□□□ -1.64
SUB1-204ENST00000504016 FGAP02671 866 aa4.79□□□□□ -1.64
SUB1-204ENST00000504016 SRGAP2BP0DMP2 458 aa4.79□□□□□ -1.64
SUB1-204ENST00000504016 EEF1GP26641 437 aaKnown RBP4.79□□□□□ -1.64
SUB1-204ENST00000504016 GABRB3P28472 473 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms