RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 ELANEP08246 267 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 APOBEC3AP31941 199 aaPredicted RBP5.4□□□□□ -1.54
SCLT1-206ENST00000503565 MCM2P49736 904 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 NDUFV1P49821 464 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 RABGGTBP53611 331 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 SP2Q02086 613 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 FOXL1Q12952 345 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 E2F2Q14209 437 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 ERV3-1Q14264 604 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 CSHL1Q14406 222 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 ACOX1Q15067 660 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 CTXN3Q4LDR2 81 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 TMEM196Q5HYL7 178 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 RBM20Q5T481 1227 aaKnown RBP5.4□□□□□ -1.54
SCLT1-206ENST00000503565 PDXDC1Q6P996 788 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 CLEC9AQ6UXN8 241 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 LRRC55Q6ZSA7 311 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 RASGRP2Q7LDG7 609 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 CHD1LQ86WJ1 897 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 ABRAQ8N0Z2 381 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 OR8H2Q8N162 312 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 LRRC71Q8N4P6 559 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 C11orf44Q8N8P7 122 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 USP38Q8NB14 1042 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 LOXL4Q96JB6 756 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 TEX101Q9BY14 249 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 REXO4Q9GZR2 422 aaKnown RBP5.4□□□□□ -1.54
SCLT1-206ENST00000503565 PRKRIP1Q9H875 184 aaPredicted RBP5.4□□□□□ -1.54
SCLT1-206ENST00000503565 RMI1Q9H9A7 625 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 IL21RQ9HBE5 538 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 SMPD4Q9NXE4 827 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 SORCS3Q9UPU3 1222 aa5.4□□□□□ -1.54
SCLT1-206ENST00000503565 LOC105369274A0A096LPK9 316 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 LOC102723532A0A0G2JNH3 316 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 GXYLT2A0PJZ3 443 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 M0QYT0 321 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 DOK2O60496 412 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 ZBED4O75132 1171 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 TMEM63AO94886 807 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 ERBB2P04626 1255 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 CPA1P15085 419 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 RPS6KB1P23443 525 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 PRKAR1BP31321 381 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 MSX2P35548 267 aaPredicted RBP5.39□□□□□ -1.55
SCLT1-206ENST00000503565 PBX1P40424 430 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 RAD52P43351 418 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 PDE6CP51160 858 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 ATXN1P54253 815 aaKnown RBP5.39□□□□□ -1.55
SCLT1-206ENST00000503565 DRG2P55039 364 aaKnown RBP5.39□□□□□ -1.55
SCLT1-206ENST00000503565 FAM3BP58499 235 aaPredicted RBP5.39□□□□□ -1.55
SCLT1-206ENST00000503565 RNASE9P60153 205 aaKnown RBP5.39□□□□□ -1.55
SCLT1-206ENST00000503565 MTAPQ13126 283 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 DYRK1AQ13627 763 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 BAK1Q16611 211 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 LY6KQ17RY6 165 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 CD300EQ496F6 205 aaPredicted RBP5.39□□□□□ -1.55
SCLT1-206ENST00000503565 WDR45BQ5MNZ6 344 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 DEPDC1Q5TB30 811 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 H1FNTQ75WM6 255 aaPredicted RBP5.39□□□□□ -1.55
SCLT1-206ENST00000503565 GALNT5Q7Z7M9 940 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 GGNQ86UU5 652 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 TTC30AQ86WT1 665 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 ADGRG5Q8IZF4 528 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 OR4N4Q8N0Y3 316 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 TTC9BQ8N6N2 239 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 ZMIZ2Q8NF64 920 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 LINS1Q8NG48 757 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 Q8TCH9 128 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 SLC22A17Q8WUG5 538 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 MPHOSPH9Q99550 1183 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 PAAF1Q9BRP4 392 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 C17orf80Q9BSJ5 609 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 HERC2P3Q9BVR0 1158 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 PHF7Q9BWX1 381 aaPredicted RBP5.39□□□□□ -1.55
SCLT1-206ENST00000503565 C1QTNF3Q9BXJ4 246 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 ARHGAP39Q9C0H5 1083 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 PLEKHA2Q9HB19 425 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 NFU1Q9UMS0 254 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 GPR34Q9UPC5 381 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 RCE1Q9Y256 329 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 ZBTB1Q9Y2K1 713 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 PCDHB7Q9Y5E2 793 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 SPATA31A3Q5VYP0 1347 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 FER1L4A9Z1Z3 1794 aa5.39□□□□□ -1.55
SCLT1-206ENST00000503565 PRAMEF33A0A0G2JMD5 474 aa5.38□□□□□ -1.55
SCLT1-206ENST00000503565 A0A1W2PS29 197 aa5.38□□□□□ -1.55
SCLT1-206ENST00000503565 PI4KAP2A4QPH2 592 aa5.38□□□□□ -1.55
SCLT1-206ENST00000503565 ZAR1LA6NP61 321 aa5.38□□□□□ -1.55
SCLT1-206ENST00000503565 M0QZQ0 153 aa5.38□□□□□ -1.55
SCLT1-206ENST00000503565 CTIFO43310 598 aaKnown RBP5.38□□□□□ -1.55
SCLT1-206ENST00000503565 AHCYL1O43865 530 aa5.38□□□□□ -1.55
SCLT1-206ENST00000503565 TSPAN3O60637 253 aa5.38□□□□□ -1.55
SCLT1-206ENST00000503565 PRAMEF10O60809 474 aa5.38□□□□□ -1.55
SCLT1-206ENST00000503565 TMCC2O75069 709 aa5.38□□□□□ -1.55
SCLT1-206ENST00000503565 HEXIM1O94992 359 aaKnown RBP5.38□□□□□ -1.55
SCLT1-206ENST00000503565 LARGE1O95461 756 aa5.38□□□□□ -1.55
SCLT1-206ENST00000503565 VNN1O95497 513 aa5.38□□□□□ -1.55
SCLT1-206ENST00000503565 GPANK1O95872 356 aa5.38□□□□□ -1.55
SCLT1-206ENST00000503565 ZNF20P17024 532 aa5.38□□□□□ -1.55
SCLT1-206ENST00000503565 TGM1P22735 817 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms