RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 PPP1R21Q6ZMI0 780 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 USP53Q70EK8 1073 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 CHSY3Q70JA7 882 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 PODNQ7Z5L7 613 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 ZNF677Q86XU0 584 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 CLEC10AQ8IUN9 316 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 ZFPM1Q8IX07 1006 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 DMRTC2Q8IXT2 367 aaPredicted RBP4.12□□□□□ -1.75
CLTC-209ENST00000498711 MYCT1Q8N699 235 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 GRK7Q8WTQ7 553 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 NSMCE1Q8WV22 266 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 ARHGEF2Q92974 986 aaKnown RBP4.12□□□□□ -1.75
CLTC-209ENST00000498711 RSRC1Q96IZ7 334 aaKnown RBP4.12□□□□□ -1.75
CLTC-209ENST00000498711 IFT74Q96LB3 600 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 ACCSQ96QU6 501 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 NTPCRQ9BSD7 190 aaKnown RBP4.12□□□□□ -1.75
CLTC-209ENST00000498711 HERPUD2Q9BSE4 406 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 DDX23Q9BUQ8 820 aaKnown RBP4.12□□□□□ -1.75
CLTC-209ENST00000498711 RHOBTB2Q9BYZ6 727 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 WDR11Q9BZH6 1224 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 TMEM117Q9H0C3 514 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 UNC45AQ9H3U1 944 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 UBE2TQ9NPD8 197 aaPredicted RBP4.12□□□□□ -1.75
CLTC-209ENST00000498711 SAR1AQ9NR31 198 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 GPRC5DQ9NZD1 345 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 FBXL21Q9UKT6 434 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 NAALADL1Q9UQQ1 740 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 TRAF6Q9Y4K3 522 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 ZNF541Q9H0D2 1346 aa4.12□□□□□ -1.75
CLTC-209ENST00000498711 ZNFX1Q9P2E3 1918 aaKnown RBP4.12□□□□□ -1.75
CLTC-209ENST00000498711 TCRBV5S1A1TA0A578 114 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 MEGF11A6BM72 1044 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 TYROBPO43914 113 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 HNRNPCL1O60812 293 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 RNGTTO60942 597 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 PEX11AO75192 247 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ENTPD3O75355 529 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 DEAF1O75398 565 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 NDUFB10O96000 172 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PLS3P13797 630 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CYP11B1P15538 503 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CREB1P16220 341 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 FGFR4P22455 802 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 HSD17B4P51659 736 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 JAG1P78504 1218 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CDK18Q07002 472 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PRPF4BQ13523 1007 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 PPP2R5DQ14738 602 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ZKSCAN8Q15776 578 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 SLC35F1Q5T1Q4 408 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ARMCX6Q7L4S7 300 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ENOSF1Q7L5Y1 443 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 TBC1D1Q86TI0 1168 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 DDX53Q86TM3 631 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 TRABD2AQ86V40 505 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 KATNAL2Q8IYT4 538 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 FIBCD1Q8N539 461 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ZCCHC9Q8N567 271 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 DTWD1Q8N5C7 304 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 DNAJB8Q8NHS0 232 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CYP2W1Q8TAV3 490 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ZNF564Q8TBZ8 553 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 MZB1Q8WU39 189 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 C10orf82Q8WW14 230 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 SEMA4DQ92854 862 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 VCPIP1Q96JH7 1222 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 RMDN2Q96LZ7 410 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 SELENOSQ9BQE4 189 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 SENP7Q9BQF6 1050 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 MENTQ9BUN1 341 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ASPNQ9BXN1 380 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 NMRK2Q9NPI5 230 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PDLIM7Q9NR12 457 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CYP26B1Q9NR63 512 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PRR13Q9NZ81 148 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PI4KBQ9UBF8 816 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ASB3Q9Y575 518 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 UBIAD1Q9Y5Z9 338 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 UMODL1Q5DID0 1318 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 EMSYQ7Z589 1322 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 MYPNQ86TC9 1320 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 SCN9AQ15858 1988 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ALOX15BO15296 676 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PSTPIP1O43586 416 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 EXOC3O60645 756 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 EDF1O60869 148 aaKnown RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 HIP1RO75146 1068 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 STBD1O95210 358 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 LINGO3P0C6S8 592 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 TRIM49P0CI25 452 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 TRIM49CP0CI26 452 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 PIM1P11309 404 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 BMP3P12645 472 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 CALB2P22676 271 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 ITGA8P53708 1063 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 POLGP54098 1239 aaPredicted RBP4.11□□□□□ -1.75
CLTC-209ENST00000498711 MFAP3P55082 362 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 IL2P60568 153 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 SATB1Q01826 763 aa4.11□□□□□ -1.75
CLTC-209ENST00000498711 GCNT1Q02742 428 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms