RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 E7ENQ6 273 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 APOC4-APOC2K7ER74 178 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 SMAPO00193 183 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 PRRG1O14668 218 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 TNFRSF10BO14763 440 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 APOL1O14791 398 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 MCF2LO15068 1137 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 NCAM2O15394 837 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 DAPK3O43293 454 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 TLL1O43897 1013 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 B4GALT3O60512 393 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 CST8O60676 142 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 ABCB7O75027 752 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 EFEMP2O95967 443 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 APOC2P02655 101 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 ITGAVP06756 1048 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 HAPLN1P10915 354 aaPredicted RBP8.79□□□□□ -1
SF3A1-210ENST00000498259 ATF2P15336 505 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 ATP2A2P16615 1042 aaKnown RBP8.79□□□□□ -1
SF3A1-210ENST00000498259 ITIH2P19823 946 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 IGFBP6P24592 240 aaPredicted RBP8.79□□□□□ -1
SF3A1-210ENST00000498259 CCR1P32246 355 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 OR1D2P34982 312 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 HCAR3P49019 387 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 NDUFV1P49821 464 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 HDAC4P56524 1084 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 DEFB103AP81534 67 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 UBE3AQ05086 875 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 SCAPQ12770 1279 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 NME3Q13232 169 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 NNTQ13423 1086 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 RAB33AQ14088 237 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 HLTFQ14527 1009 aaKnown RBP eCLIP8.79□□□□□ -1
SF3A1-210ENST00000498259 TAF5Q15542 800 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 TAZQ16635 292 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 TCTN1Q2MV58 587 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 SMTNL2Q2TAL5 461 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 PABPC1LQ4VXU2 614 aaKnown RBP8.79□□□□□ -1
SF3A1-210ENST00000498259 KCNT1Q5JUK3 1230 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 RTP2Q5QGT7 225 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 KAZNQ674X7 775 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 PDE12Q6L8Q7 609 aaKnown RBP8.79□□□□□ -1
SF3A1-210ENST00000498259 FAM117BQ6P1L5 589 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 MFSD7Q6UXD7 560 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 CCNI2Q6ZMN8 369 aaPredicted RBP8.79□□□□□ -1
SF3A1-210ENST00000498259 RNF168Q8IYW5 571 aaPredicted RBP8.79□□□□□ -1
SF3A1-210ENST00000498259 C7orf61Q8IZ16 206 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 ZNF276Q8N554 614 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 GOLGA6L1Q8N7Z2 621 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 PRELID2Q8N945 189 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 LRRN4CLQ8ND94 238 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 CLEC4CQ8WTT0 213 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 RAPGEF5Q92565 580 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 DPF3Q92784 378 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 KHSRPQ92945 711 aaKnown RBP eCLIP8.79□□□□□ -1
SF3A1-210ENST00000498259 CLP1Q92989 425 aaKnown RBP8.79□□□□□ -1
SF3A1-210ENST00000498259 FBXO32Q969P5 355 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 LRRC45Q96CN5 670 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 SAMD11Q96NU1 681 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 EPAS1Q99814 870 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 HEMGNQ9BXL5 484 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 DHX35Q9H5Z1 703 aaKnown RBP8.79□□□□□ -1
SF3A1-210ENST00000498259 RC3H2Q9HBD1 1191 aaKnown RBP8.79□□□□□ -1
SF3A1-210ENST00000498259 GDF3Q9NR23 364 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 TMLHEQ9NVH6 421 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 DDIT4Q9NX09 232 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 FBXW11Q9UKB1 542 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 AP4E1Q9UPM8 1137 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 ASB3Q9Y575 518 aa8.79□□□□□ -1
SF3A1-210ENST00000498259 FAM92AA1XBS5 289 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 F8W810 466 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 PI4K2BG5E9Z4 385 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 RAD51CO43502 376 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 GABBR2O75899 941 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 FGF18O76093 207 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 STK10O94804 968 aaKnown RBP8.78□□□□□ -1
SF3A1-210ENST00000498259 RB1P06400 928 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 ADH1AP07327 375 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 OR4Q2P0C623 313 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 ITGB8P26012 769 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 SERPINB6P35237 376 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 ADRA1BP35368 520 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 CXCR3P49682 368 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 EPHB3P54753 998 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 DUSP4Q13115 394 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 XRCC4Q13426 336 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 PPP2R5DQ14738 602 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 ANKRD20A8PQ5CZ79 823 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 PPP6R3Q5H9R7 873 aaPredicted RBP8.78□□□□□ -1
SF3A1-210ENST00000498259 FBXO38Q6PIJ6 1188 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 CCDC149Q6ZUS6 474 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 JAMLQ86YT9 394 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 HERC6Q8IVU3 1022 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 VPS52Q8N1B4 723 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 ELMOD1Q8N336 334 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 ARFGAP1Q8N6T3 406 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 ATAD1Q8NBU5 361 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 FAM71BQ8TC56 605 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 RSAD2Q8WXG1 361 aa8.78□□□□□ -1
SF3A1-210ENST00000498259 IFT81Q8WYA0 676 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms