RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 MRPL58Q14197 206 aaKnown RBP18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 DPYSL2Q16555 572 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 NFE2Q16621 373 aaPredicted RBP18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 ANKRD20A8PQ5CZ79 823 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 SDHAF4Q5VUM1 108 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 PM20D1Q6GTS8 502 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 TAS1R1Q7RTX1 841 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 BNIPLQ7Z465 357 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 NECAB2Q7Z6G3 386 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 PYROXD2Q8N2H3 581 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 TTC9BQ8N6N2 239 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 GLIS1Q8NBF1 620 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 TTC13Q8NBP0 860 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 RNF157Q96PX1 679 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 KCTD15Q96SI1 283 aaPredicted RBP18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 ZNF670Q9BS34 389 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 C10orf88Q9H8K7 445 aa18.53■□□□□ 0.56
CHRNA4-206ENST00000498043 TIMP1P01033 207 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 KRT14P02533 472 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 GBP1P32455 592 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 ALDH7A1P49419 539 aaKnown RBP18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 DEFB103AP81534 67 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 LMNB2Q03252 620 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 ELAVL2Q12926 359 aaKnown RBP18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 CALCOCO2Q13137 446 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 TFDP2Q14188 446 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 MREGQ8N565 214 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 ALLCQ8N6M5 410 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 IRGQQ8WZA9 623 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 SNF8Q96H20 258 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 FAM204AQ9H8W3 233 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 FZD10Q9ULW2 581 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 PCDHB5Q9Y5E4 795 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 USP3Q9Y6I4 520 aa18.52■□□□□ 0.56
CHRNA4-206ENST00000498043 GOLGA6BA6NDN3 693 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 OR6C75A6NL08 312 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 H3BQF6 201 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 SGK1O00141 431 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 HSPA1AP0DMV8 641 aaKnown RBP18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 HSPA1BP0DMV9 641 aaKnown RBP18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 RAG1P15918 1043 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 HSPA9P38646 679 aaKnown RBP18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 ADCY8P40145 1251 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 DDR2Q16832 855 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 BSPRYQ5W0U4 402 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 C1orf228Q6PIY5 440 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 RSPO2Q6UXX9 243 aaPredicted RBP18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 TMC3Q7Z5M5 1100 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 PQLC3Q8N755 202 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 ATAD1Q8NBU5 361 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 PCDH19Q8TAB3 1148 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 FUBP3Q96I24 572 aaKnown RBP eCLIP18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 CWH43Q9H720 699 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 DDIT4Q9NX09 232 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 MTMR10Q9NXD2 777 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 TNFRSF10BO14763 440 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 APOL1O14791 398 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 ITGAVP06756 1048 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 ZSCAN5DPP0CG00 497 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 ETS1P14921 441 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 KLRC2P26717 231 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 CBX1P83916 185 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 PRSS55Q6UWB4 352 aaPredicted RBP18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 CCDC89Q8N998 374 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 FAM71BQ8TC56 605 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 TTPALQ9BTX7 342 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 TMEM106CQ9BVX2 250 aa18.51■□□□□ 0.55
CHRNA4-206ENST00000498043 ZNF638Q14966 1978 aaKnown RBP18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 ABHD14A-ACY1A0A1B0GW23 586 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 MCF2LO15068 1137 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 SOAT2O75908 522 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 ACRP10323 421 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 IVDP26440 423 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 CTCFP49711 727 aaPredicted RBP18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 EIF3EP60228 445 aaKnown RBP18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 DHX9Q08211 1270 aaKnown RBP18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 GPS2Q13227 327 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 SPOUT1Q5T280 376 aaKnown RBP18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 B4GALNT4Q76KP1 1039 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 SCML4Q8N228 414 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 PLD5Q8N7P1 536 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 P3H4Q92791 437 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 ART4Q93070 314 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 LRRC45Q96CN5 670 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 FAF2Q96CS3 445 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 FRMD8P1Q9BZ68 369 aaPredicted RBP18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 WHRNQ9P202 907 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 HEY1Q9Y5J3 304 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 TP73O15350 636 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 MAP3K6O95382 1288 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 IFNB1P01574 187 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 AMHP03971 560 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 OAS2P29728 719 aaKnown RBP18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 GDF10P55107 478 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 NOMO1Q15155 1222 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 TAC4Q86UU9 113 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 ZC3H18Q86VM9 953 aaKnown RBP18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 VSIG1Q86XK7 387 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 TOP1MTQ969P6 601 aa18.5■□□□□ 0.55
CHRNA4-206ENST00000498043 CSPG4P5Q96PW8 444 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms