RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 TSG101Q99816 390 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 BBS2Q9BXC9 721 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 DUSP16Q9BY84 665 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 DNAJC17Q9NVM6 304 aaKnown RBP12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 NAGPAQ9UK23 515 aa12.39□□□□□ -0.43
NUDCD3-211ENST00000497978 TCRBV21S2A2A0A5A6 115 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 NEDD8-MDP1E9PL57 170 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 KHNYNO15037 678 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 DHPSP49366 369 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 KIF11P52732 1056 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 SLC8A3P57103 927 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 ZNF394Q53GI3 561 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 PPP1R26Q5T8A7 1209 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 TCEAL6Q6IPX3 200 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 SDE2Q6IQ49 451 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 TPGS1Q6ZTW0 290 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 LPCAT2Q7L5N7 544 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 CCDC186Q7Z3E2 898 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 PLPP6Q8IY26 295 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 OLIG1Q8TAK6 271 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 TCEAL3Q969E4 200 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 WBP2Q969T9 261 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 EDEM2Q9BV94 578 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 GTPBP4Q9BZE4 634 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 FAM124BQ9H5Z6 455 aaPredicted RBP12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 GDPD2Q9HCC8 539 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 RXFP3Q9NSD7 469 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 OSER1Q9NX31 292 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 RAB20Q9NX57 234 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 HOOK1Q9UJC3 728 aaKnown RBP12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 THADAQ6YHU6 1953 aa12.38□□□□□ -0.43
NUDCD3-211ENST00000497978 CACNG3O60359 315 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 ADAM23O75077 832 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 SMC2O95347 1197 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 TYRP14679 529 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 HNRNPLP14866 589 aaKnown RBP eCLIP12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 BCKDHBP21953 392 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 P2RY2P41231 377 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 DPP6P42658 865 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 MCCD1P59942 119 aaPredicted RBP12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 PNOCQ13519 176 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 TCERG1LQ5VWI1 586 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 SMYD4Q8IYR2 804 aaPredicted RBP12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 ARHGAP18Q8N392 663 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 ZNF276Q8N554 614 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 RLN3Q8WXF3 142 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 SEMA4DQ92854 862 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 EEF2KMTQ96G04 330 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 TMEM176AQ96HP8 235 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 CNTNAP3BQ96NU0 1288 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 GSDMAQ96QA5 445 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 CNTNAP3Q9BZ76 1288 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 NMUR1Q9HB89 426 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 ZDHHC4Q9NPG8 344 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 CISHQ9NSE2 258 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 CLIC5Q9NZA1 410 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 MARK1Q9P0L2 795 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 NUDT5Q9UKK9 219 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 ZNF510Q9Y2H8 683 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 NCOR2Q9Y618 2525 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 ABCA7Q8IZY2 2146 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 NUP205Q92621 2012 aa12.37□□□□□ -0.43
NUDCD3-211ENST00000497978 TM4SF5O14894 197 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 MDM4O15151 490 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 SLC16A3O15427 465 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 GREM1O60565 184 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 HOXB2P14652 356 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 NTSR1P30989 418 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 PRCPP42785 496 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 DGKGP49619 791 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 YWHAEP62258 255 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 COG7P83436 770 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 BECN1Q14457 450 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 DCAF17Q5H9S7 520 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 SPDYCQ5MJ68 293 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 ZNF658Q5TYW1 1059 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 DAB2IPQ5VWQ8 1189 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 MIB1Q86YT6 1006 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 FMR1NBQ8N0W7 255 aaPredicted RBP12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 SLC4A11Q8NBS3 891 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 PIGKQ92643 395 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 LSM14BQ9BX40 385 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 UBXN6Q9BZV1 441 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 DCLK3Q9C098 648 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 STARD13Q9Y3M8 1113 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 USP3Q9Y6I4 520 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 DNAH14Q0VDD8 3507 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 SPTBN2O15020 2390 aa12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 MYO18AQ92614 2054 aaKnown RBP12.36□□□□□ -0.43
NUDCD3-211ENST00000497978 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 LNP1A1A4G5 178 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 C4orf47A7E2U8 309 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 TRIM24O15164 1050 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 STC2O76061 302 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 CHKAP35790 457 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 RAD23BP54727 409 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 FKBP3Q00688 224 aaKnown RBP12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 STIM1Q13586 685 aa12.35□□□□□ -0.43
NUDCD3-211ENST00000497978 MAP7D1Q3KQU3 841 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms